Viruses: 962675
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Entry
962675 CDS
T40000
Symbol
BSMVs3gp1
Name
(RefSeq) Barley stripe mosaic virus; RNA-directed RNA polymerase
Virus
12327
Barley stripe mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
962675
NCBI-ProteinID:
NP_604481
RS:
NC_003478
UniProt:
Q80873
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Position
NC_003478:89..2404
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AA seq
771 aa
AA seq
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MDVVKKFAVMSVTVVAGPVLTLSSPVVVTFGTSLIAVSLVKRLLQEQPRVIAHDHEHYPG
GSESSSSSCATAPILRNLSRDQCDSENIGCSSSACSPSEIVKVTRQVVEVERGLYRDKQQ
FGMDVVKKFAVMSVTVVAGPVLTLSSPVVVTFGTSLIAVSLVKRLLQEQPRVIAHDHEHY
PGGSESSSSSCATAPILRNLSRDQCDSENIGCSSSACSPSEIVKVTRQVVEVERGLYRDI
FQDNEIPSVMEEKLQKLLYSEGEKIRRRCQFEASTMHSRKVKVPEVGTIPDIQTWFDATF
PGNSVRFSDFDGYTVATEDINMDVQDCRLKFGKTFRPYEFKESLKPVLRTAMPEKRQGSL
IESVLAFRKRNLAAPRLQGALNEWHTIENVLKKALKVFFFEDLIDRTDHCTYESALRWWD
KQSVTARAQLVADQRRLCDVDFTTYNFMIKNDVKPKLDLTPQVEYAALQTVVYPDKIVNA
FFGPIIKEINERIIRALRPHVVFNSRMTADELNETVAFLTPHKYRALEIDFSKFDKSKTG
LHIKAVIGLYKLFGLDGLLKVLWEKSQYQTYVKDRNFGLEAYLLYQQKSGNCDTYGSNTW
SAALALLDCLPLEDAHFCVFGGDDSLILFDQGYIISDPCRQLAGTWNLECKVFDFKYPAF
CGKFLLCIDGKYQFVPDAAKFITKLGRTDVRDVEVLSEIYISINDNYKSYKDFKVLDALD
KALVDRYRSPYSAISALVSLCYHIFDFNKFKLLFNCEGKFVDKKLRKDFEW
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgtgaagaaattcgccgtcatgtcagtgactgtagtagcaggtcccgtcctt
acgctttcatcacctgtggtggtgacgtttggaacaagcttaattgccgtatctttggtg
aaacggttgctacaggaacaaccccgtgtaattgctcacgatcacgaacattacccaggt
ggttctgagagcagttctagctcttgtgctaccgcgcctattttacgtaatctttcgcga
gatcagtgcgattcagagaatattggatgcagttctagcgcctgttctccgtctgaaatt
gtgaaagttacaaggcaggtagtggaagttgaacgtggtctttaccgggacaaacaacaa
ttcggcatggatgttgtgaagaaattcgccgtcatgtcagtgactgtagtagcaggtccc
gtccttacgctttcatcacctgtggtggtgacgtttggaacaagcttaattgccgtatct
ttggtgaaacggttgctacaggaacaaccccgtgtaattgctcacgatcacgaacattac
ccaggtggttctgagagcagttctagctcttgtgctaccgcgcctattttacgtaatctt
tcgcgagatcagtgcgattcagagaatattggatgcagttctagcgcctgttctccgtct
gaaattgtgaaagttacaaggcaggtagtggaagttgaacgtggtctttaccgggacatt
tttcaggacaacgaaatcccatcagtcatggaagagaaactgcagaaactcctttactct
gagggtgagaagattcgaagacgttgccaatttgaagcatcaacgatgcactcacgcaaa
gtaaaggttccggaggtaggtactatcccagatatccaaacttggttcgatgctacgttt
cctggtaactccgttaggttttctgatttcgacggttatactgttgctacggaggacatt
aacatggatgttcaggattgtagacttaagttcgggaagacttttcgaccttatgaattt
aaggaatcactgaaaccagtactgaggacagcaatgccagaaaagcgacagggtagtttg
attgaaagtgtgctggcctttcgtaaaagaaatttggctgcgcccagattacaaggggct
ttgaatgaatggcacacaattgagaatgtgctgaagaaggcgttaaaggtattcttcttt
gaagatttaattgatcgaacggatcattgcacttacgagtcagcgctcagatggtgggat
aaacaatcagtgacggctcgagcgcagctcgtggcggaccaacggaggttatgtgatgtt
gacttcacgacttataacttcatgataaaaaatgatgtaaaaccgaagttagatctaaca
cctcaagttgaatatgcagctttgcagactgttgtgtatcctgataagatagtcaatgct
ttctttggtccgatcataaaggagattaatgaacggatcatcagagcgcttagacctcat
gtggtctttaattctcgtatgactgctgatgaactgaatgaaacagttgcctttttgaca
cctcacaagtacagagccttagagattgacttttcaaaatttgataaatcaaagactggg
cttcatatcaaagctgtcattggactctataagctctttggtctagatggcctgttaaaa
gtactctgggaaaaatcgcaatatcagacttacgtgaaagatagaaacttcggtctcgag
gcatatctattatatcagcaaaagtcaggaaattgtgacacttacggttcgaacacctgg
tctgccgccttggcgttgttagattgtcttcctttggaagatgcacatttctgtgtattt
ggtggtgatgattcattgatattgtttgatcagggatacataatttccgacccatgccgg
caacttgccggtacttggaatcttgaatgtaaagtgttcgacttcaagtaccccgcattt
tgtggtaaatttctgctgtgcatagatggaaaatatcagtttgttccagatgcggcaaaa
tttatcacaaaattaggtagaactgatgtgagagatgtagaagttttgagtgagatttat
atctctatcaatgacaattacaaatcttacaaagactttaaggtgcttgatgctttggat
aaggctttagtggacagatatcgatccccttatagtgctatttctgctttggtttcttta
tgttatcatatctttgactttaataagtttaagttgctgtttaattgtgaagggaaattt
gtggataagaagctgagaaaggacttcgagtggtga
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