Viruses: 963861
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Entry
963861 CDS
T40000
Symbol
BaYMVs1gp1
Name
(RefSeq) Barley yellow mosaic virus; polyprotein
Virus
12465
Barley yellow mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_1
Poty_PP
Poty_coat
Peptidase_C4
DEAD
AAA_11
Helicase_C
AAA_19
AAA_22
SNF2-rel_dom
T2SSE
Motif
Other DBs
NCBI-GeneID:
963861
NCBI-ProteinID:
NP_148999
RS:
NC_002990
UniProt:
Q9YJW3
LinkDB
All DBs
Position
NC_002990:172..7404
Genome browser
AA seq
2410 aa
AA seq
DB search
MEQTLAQAVSRRNKTDTPMAEERKHFSPMNFSANFVAPELFYSANVRKIKNIFKERSTTR
FLDAISSDFELVAFLTLSPAHLMQLETVLRQEMRSCAVPIVTSDASFETVAVIKTALDGM
RFHFGYTTLEKGWISMMRHAESCLQESSSSAVNDLQTPIKRVGSLLLSGKNRVEGCELSV
LNLTARRFRIEYGLNGTYFGEHVAMLRDLKRYIYGTVPKEFLWAKTKKHLPFTIPAWITR
TPIDCFLFCLRVIPILHRFGVAMSLIYFSCVAALNFPAFMGFLFKRQFAKYLAHSFAKHS
IYFMFLTIVAILWSFRTFTSQKPKIVLQARSTAEKEKKLMMILASVVGITYLFDYDIAEA
LGNCLHKISRLSSYLLDDHQGIASRMFGASYGLQAGDSAEDAVTTIISDLLSVTFKIVDE
DASQGTVEDASETTFHSWVGVNTLAGRNMSRPLQYSVNKTYALTPQNVQLQARAMADANN
CWSMVVGHTGSGKSTYLPVQYSNYLSTKSDRRQQILICEPTQAATENVCAGVAANLGRAV
YGRHEGWSRMGDHCIQVMTYGSALQCHAMDPSFISTFDAIFLDEAHDVKEHSLVFESICD
TFKSVRKFYVSATPRDGSVCPEAARKYPLHVETSVCDSYRKFIAAQGGGDLLDISKHDTA
LVFLAGRPECIKAANAWNASVTGEKRAFSLSSDNFATDFSMLTERLKTHKTIIFTTNIIE
TGVTLSVDCVVDFGHTMRPCLDLNQKSLRLDRRKVTRNERQQRIGPTGRLKDGYAIVCGD
VDRAVNVISPDVLYGAALLSFKHNVPFYMNETFESSWLKGVTKAQADTMTIFKLPIFLTR
DLINADGSVAKEFLDVLKKHQFTTSDIKQAPSITAKHIFPTWASYFSLHQALHYGDDKDE
IPHELRYARVPFSVTTLSKFDWPALALACEKHRASMSNVFAGIEEPARVVTLQTNPANIQ
ASITHLMHMSKNYKTLIENNQHVRQSMMTNVMYKWFSSTRITKDLDRNLRRCTDNLAVVE
ATLSSLRQILAGNTQVHATPHMQSTLEDIIGLQASDTLTEESLASALGIFVPKSNLFLLL
ATKGFKLVYVICILLLVNLVYIGLRKWREHLKQKGSDEILTNTMPVSEGGEILAEVMKME
PKMRKNIKRDMDEAVESKLCGFTFVFPDDDKIGLEGKGNKYRPREDARLMYSTREDATFD
AWNEKAKERRKKVTDKSEPELRRAYEKRPYFNFYDLQTDSNILEAIFYTTEGDEFFRTAD
PNKDMNLVADKLRSFLDTKLVVGHHQRKLLEETAQVVIKDTKGTAHKMEISQHDPDCLKQ
NGSGKVGYPEHRGQFRQEGVAITSDYDLGVEFGTDTDNITLEASTGILLSQVGVDVATRV
GRISIGTFNMNCYFYNDWILVPGHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLD
VIAIRRPAILRPRTKLVKAFAIEEPVIAQMVFVDAQGVRKFTQSDWARKGENSGRWSHKI
STVLGMCGCQFWTLERQIDGIHVATNYTKKRNEFQPFTQEVVDFINGPGTKIPYCPWVFD
RPACGYASHTALFEKPTTLTDVIHMQASDGLHNINNAIEGFGSSLRGQLVSPPTESTRQR
FDKLFGSGSFELIGQMNKGLIDKHVIVGENDDVYDFMREHPTFTWLKDFMNEYAPSVLSY
SAYYKDLCKYNRAKHVLTYNPEELHYATKGLIKMLEDAGLTQGSVRTPQQVISDIQWNTS
AGPSYQGKKRDLCAHLSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIEKVEPEKT
RVFTASPITSLFAMKFYVDDFNKKFYATNLKAPHTVGINKFGRGWERLHDKLNRPGWLHG
SGDGSRFDSSIDPFFFDVVKTIRKHFLPSEHHKAIDLIYDEILNTTICLANGMVIKKNVG
TQRQPSTVVDNTLVLMTAFLYAYIHKTGDRELALLNERFIFVCNGDDNKFAISPQFDEEF
GHDFSPELVELGLTYEFDDITSDICENPYMSLTMVKTPFGVGFSLPVERIIAIMQWSKKG
GVLHSYLAGISAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQSSTALPIPSMLDV
YRLHYGDDEIWLQAADPLTDAQKEAAHTAAADRARLDLADADRRRKVEADRVEAARVKKA
ADAALKPVNLTATRMPTEDDGKLKTPSGARIPSSAADGNWSVPATKQVNAGLTLKIPLNK
LKSVPKSVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDALIPFIGWCCNNGTSDKH
AENQVMQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVAHWSMK
HGASANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRKTTNHRV
LDSDGHPELT
NT seq
7233 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaccctagctcaagctgtgtcacggagaaacaaaacagacacacctatggca
gaagagcggaaacatttcagccccatgaatttttccgcaaactttgttgctcctgagctc
ttttatagtgctaatgtgaggaaaatcaaaaatatcttcaaagagcgcagcacaactcgg
tttctggacgcgatttcaagtgactttgagcttgtcgcttttctcaccttgagtcctgct
catttaatgcaacttgaaacagttctgcgccaagagatgcgttcgtgcgctgtgccaatt
gtcacctctgatgctagctttgaaacagttgctgtcatcaaaaccgctctggatggcatg
agatttcactttggatacactactcttgaaaaggggtggatatctatgatgcgccatgcg
gagagttgcctgcaagagagctcttcttcggctgtgaatgatctgcagacgccaattaaa
cgtgttggatcactgctcctgagtggaaaaaatcgcgtagaaggctgcgaactatctgtc
ttgaacctcaccgcgcgacgtttcaggatcgaatatgggctaaatggtacatactttggc
gaacatgttgctatgctacgcgacttaaaacgttatatctatggtaccgtaccaaaagag
tttttgtgggcgaaaaccaaaaagcacttaccgttcacaatccccgcgtggatcacgcgt
acgcccatcgactgtttcttgttctgtcttcgcgttatccctatcttacataggtttggt
gttgccatgtcacttatttacttttcgtgtgttgccgctttaaattttcctgcttttatg
ggtttcttatttaagcgtcagttcgctaagtatttagctcactcttttgctaaacactcc
atctactttatgtttttaactatagttgctattttatggtctttccgcacttttacttct
caaaaaccaaaaatagtgcttcaggctaggagcacagcagaaaaagagaaaaagcttatg
atgattctagctagtgtcgttgggatcacttacctcttcgactacgacatagcagaagct
cttgggaattgtctacataaaataagccgtctgtcctcatatcttctcgacgaccatcaa
ggcattgcatcacgaatgtttggagcaagctacgggcttcaggctggcgacagtgctgag
gatgcagtcacaacgataatcagcgacttactgtctgttacttttaaaattgtggatgaa
gacgcatcgcagggcaccgtggaggacgcatctgagacaaccttccacagttgggttggt
gttaacacacttgcaggccgcaatatgtcaagaccactccagtatagcgtcaataaaacg
tatgcactcacacctcaaaatgtccagctccaagcgcgagctatggcagacgctaacaac
tgctggtcaatggttgttggtcatacaggatctggaaagtccacatacttacctgtgcag
tactccaactacttgtccactaagagtgataggcgacagcaaattcttatctgcgagcca
actcaggctgccactgagaatgtttgcgctggcgtcgctgccaatcttggcagagctgtt
tatgggcgccatgagggttggtccagaatgggggatcattgcattcaagttatgacgtat
ggttctgcgctccagtgtcacgccatggaccccagcttcatatcaactttcgacgcaatt
tttcttgatgaagcacacgacgttaaagagcactctctagtctttgagagcatttgtgac
acattcaaatccgttcgaaagttctatgtttcagcaactcccagagatggcagtgtttgt
cctgaagcagctaggaaatatcctttacatgttgaaactagcgtttgcgattcgtatcgg
aagttcattgcagctcaaggcgggggagatttgttggacatctcaaaacatgacacagct
ttagtttttctagcgggacggcccgagtgtattaaagctgctaatgcctggaacgctagt
gtcactggtgagaagcgcgccttttccttgtcgagcgacaactttgctactgacttctca
atgctaactgagaggctcaaaacacacaaaaccatcatcttcaccacgaacataattgaa
acaggtgttactctcagcgttgactgtgttgtggatttcggccacacaatgcgcccatgt
ttagatctcaatcaaaaatcattgcgtcttgatcgacgcaaagtgacgcggaacgaaaga
cagcagagaattgggccaacaggtcggctcaaagatggatacgccatagtgtgtggagat
gttgatagagctgtgaacgtcatctctcctgatgttctttatggagctgctcttctgagt
tttaaacacaatgtgcctttctacatgaacgagacatttgagagttcctggttgaagggt
gttacaaaggcacaagcagacacaatgacaatcttcaagcttcccatatttctaacacga
gatctcatcaatgcagatggctcagttgctaaggagtttctcgatgtcctaaagaagcat
caattcacaacaagcgacataaagcaagcaccaagtatcacagccaaacatatcttccca
acttgggcttcatacttctctctccaccaagcacttcattatggtgatgacaaggatgag
ataccacacgaattgcgatatgcgcgtgttcccttctccgtcacaactttgagcaaattc
gattggcctgccttagctcttgcatgtgagaaacatagagcttccatgtcaaatgtgttt
gctggcatcgaggaacctgcacgcgttgtcactctacaaacaaatcctgcgaacatccaa
gcgagcatcacacatttaatgcacatgagtaagaactacaaaactcttattgaaaataat
cagcacgtgcgccaatccatgatgacgaatgtcatgtataagtggttctcttccactcgc
atcactaaagatcttgatagaaacttgcgaagatgcacggataaccttgcagttgtcgag
gccacgctcagctcacttagacaaatcttagctggcaacacgcaggttcatgcaacgcca
cacatgcagagcacccttgaggatattattgggctccaagctagcgacacacttacggaa
gagagcttagcaagcgcacttggcatctttgttccgaagagcaacctctttctgctgcta
gctaccaaaggttttaaacttgtgtacgttatctgcatcttacttcttgtgaaccttgtt
tatattggtcttcgcaagtggcgcgaacatcttaagcagaaaggaagcgatgaaatccta
actaacacaatgccagttagcgaagggggggaaattctcgccgaggtcatgaaaatggag
cccaaaatgagaaagaacatcaagagggatatggatgaagccgttgagagcaaactatgt
ggtttcacctttgtttttccagatgatgacaaaattggtcttgaaggtaagggaaacaag
taccgccctcgcgaagatgctcgtctcatgtactccactagggaagacgccacctttgac
gcttggaatgagaaagcaaaggaaaggcgtaagaaggtcaccgacaaatctgagccagag
cttcgcagagcctatgaaaagagaccgtacttcaatttctacgaccttcaaacagatagc
aacattctggaagccattttctacaccactgaaggcgatgagtttttccgaacagcagat
cccaataaggacatgaacttggttgctgacaaactgcgctcttttctcgacacaaagctt
gttgttggacaccaccagcggaagctactagaagaaacagctcaggttgttatcaaagat
acgaagggaactgcacacaagatggagatttcacagcatgatccagactgtctaaagcag
aatgggtccggcaaagttggatatccagaacaccgggggcagtttcggcaggaaggagtt
gccatcacatcggattacgatcttggagttgagtttggcaccgataccgataacatcacg
cttgaagcctctactgggatattattgtcacaagtcggggtcgacgtcgcaactcgagtt
ggaagaattagcattggtactttcaacatgaactgttacttctacaacgactggattctg
gttccgggacacctgcaagacagatccggcaacgtaacaattcaatttcctgatcaaaca
gtgcaaaccacaactgatgcactcaacgcaaatggtgtgaaacgattctatggattagat
gtgatagcaattcggcgccctgctatcttgagacctcgcaccaagttggtcaaagctttt
gctattgaggaaccggttatcgcacaaatggtctttgttgacgcacagggagttcgtaag
tttacacaatctgattgggccagaaagggggagaattccgggcgttggtcgcacaagatt
tccactgttcttggcatgtgtggatgccagttttggacgttggaaagacagattgatgga
atccatgttgccacaaactacacaaagaagcgcaacgagttccaacccttcactcaggag
gtcgttgattttataaatggacctggaacaaagatcccctactgcccatgggtattcgat
agaccggcttgtgggtatgcatcccacacagctttgttcgagaaaccaaccacactaact
gacgtcattcacatgcaagcttctgatggtttgcacaacatcaacaatgccattgagggt
tttgggagctcactgaggggtcagctcgtgtcaccacccactgaatccaccaggcaacgt
ttcgataagctgtttggtagtggcagctttgagctcattgggcaaatgaacaaaggctta
atcgacaagcacgtgattgttggggaaaatgatgatgtttacgacttcatgcgtgagcac
ccaacatttacttggttgaaagatttcatgaatgagtatgcgcctagtgttttgtcttac
tctgcttactacaaagatctttgcaagtataatcgtgcaaaacacgtgctcacttacaac
ccagaagagctccattatgcgacgaaaggactgatcaagatgttggaagacgctggcttg
acacaaggcagtgtgaggacaccccaacaagtcatttcggacattcaatggaacacttcc
gctggaccgagctatcaaggaaagaaacgcgacctctgtgcccatttgagtgatgatgag
gtgctgcatctcgctgaggtgtgtcgccaacaatttctcgagggcaagtcaaccggagta
tggaatggttctttgaaagctgagttgagaaccatcgagaaagttgagccggagaaaacg
cgtgttttcacagcctctcccataacaagcttgtttgctatgaaattctacgttgatgat
tttaacaagaagttctacgctaccaatctgaaagccccccatactgttggcatcaataag
ttcggtaggggatgggaaagattgcatgataagcttaatcgccctggatggttgcacggc
agtggagatggttctaggttcgacagctctatcgatcctttcttcttcgacgttgtgaaa
actattcgcaagcactttctcccttctgagcatcacaaagccattgatctcatatatgat
gagattctcaacacaaccatctgcctagctaatgggatggtcatcaagaagaatgttgga
acacagcggcagcctagcactgttgtcgataacacacttgtgcttatgactgcatttctc
tacgcatacattcacaaaacaggagaccgcgaattggccttgctaaacgagcgtttcatc
tttgtttgcaatggcgatgacaacaagtttgccatatctccacagtttgacgaagagttt
gggcatgatttttccccagaacttgttgaacttggactcacgtacgaatttgatgacatc
actagcgacatttgcgagaatccttatatgtccctcaccatggtgaaaaccccttttggc
gttggtttttctcttcccgtggaaagaatcatagccatcatgcaatggtccaagaaaggg
ggagttctgcactcatatttggctggcatttccgcaatttacgagtccttcaacacacca
aaacttttcaaatcaatctatgcatatcttctttggctcactgaggagcacgaagcagaa
attctcgcagccatgactcaatcctcaactgctcttcccataccatcaatgctcgatgtt
tatcggttgcattatggtgatgatgaaatttggctacaagctgctgaccctctcactgat
gcgcaaaaagaagctgcacacactgctgcagctgatagagcacgcctcgacctagccgat
gctgatcgtagacgtaaagttgaggccgaccgtgtggaagcggcaagagtcaaaaaggca
gctgatgctgcactaaaaccagttaacctcacagcaacacgcatgcccacagaagatgat
ggcaaacttaaaacaccatctggcgctagaataccatcatcagctgcagatggtaactgg
agcgtgccagcaacgaagcaagttaacgctggtttgacacttaaaattcccctgaataag
ctcaaaagtgtacccaagtctgttatggagcataacaactcagttgcactcgaatctgag
ctaaaagcctggactgatgctgtgcgcacaagtttaggtatcacaactgatgaggcatgg
atcgatgccctcattcccttcatcggatggtgctgcaataatggcacctcagacaagcat
gctgagaatcaagtaatgcaaattgacagcggaaagggagctgtcacagagatgagtctg
tccccatttattgttcatgctcgaatgaatggtggactccgaaggatcatgcgcaactac
agtgatgaaaccgtcttactcatcacaaacaacaaactagttgcacattggtcaatgaag
catggcgcttctgcaaacgcaaaatacgctttcgatttcttcgtcccacgatcatggatg
aacccacaggatatcgaagtgtcaaagcaagcgcgcttagcagcacttggaactggaacg
tataacaccatgttaacttccgacactaccaatctgcgtaagacaaccaaccacagggtt
ctggactcagatggacacccagaactaacctaa
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integrated database retrieval system
