Viruses: 963864
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Entry
963864 CDS
T40000
Symbol
RNA2, BaMMVsRNA2gp1
Name
(RefSeq) Barley mild mosaic virus; RNA2 polyprotein
Virus
12466
Barley mild mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_C6
TMV_coat
RestrictionSfiI
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
963864
NCBI-ProteinID:
NP_604490
RS:
NC_003482
UniProt:
Q65657
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Position
NC_003482:143..2827
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AA seq
894 aa
AA seq
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MMMNSTIRQGWQQVLRRFSIPASGDRLIVSNSTDQPIGLFGAFDTSLQTLSQVTNDPEIL
KQKSNIPTHLDIASVLETSPRSFPWVFLTNSFCTFGGSIHAQNLQAFATAEFKSGFCYMN
LLIPLSFDIIDAHADSFRGFVEQLPDTLGAYPSLSMVLNVMLHAATRFPEIVASPVPTIA
FDAESLQFHVTDKRGVPGMWNILKACRVYELLSLAADGIGCEYMLYPVGAAPQYSFWKKS
MDHFISDRFVEFLAMQGLLASALEQDYKTHDARDALLTALQNAGYTNVVARERRFPNGHD
PSTVWLNLNEAPISEKLTELKRYLLVGHRSDEIADITHNVHQHVFEVLKTMSVQFSKTTN
AYNRARFEVNHEVIWNAEYGRSSQQNAELEALVLFLNRQSLEIENILRRTTSPVVVTNWQ
PDVPPAAPEISEGEPTHAVATPITEAPTHATPVEVVNLPPTRSYWAETLVGVLTAILGTI
FALLTRALIRPKRLRRKSTFPWVSLDSGDEDDDHSGGGGGSPQTPGGQPPASPAPGTHQS
RFSVQDIASDTSLLSVDLDEDTLSQYDETFQTIRRALFENSFGDILQNSARWISTLEAMA
LADGNAPYTLLAQYLNGIEEAYTNFRNTGHISRATLSGFFVLEDSLRAAGIAFGGTTPTQ
TIQNQSADSPARRWKTRFEQIACELGDASIKSLADLADIIDTERERGDLTQFDVLAASSI
SSLCRAVRIISDTTDPNTQLALVENATAMQNNINAILGTNVSIPFLSATRRLLITRRIQE
AGAESRSGATPDTIQQLADAELAEIVSEANMFNEMAASQRDIANATREATIREHVLSPVN
ALANVGMAAAFFRSGGLRSRAFHPTMPTMPGSPAAIGRPMFQAFRGRGHRLNRR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaactctacgattcgccaaggatggcagcaagtgctcaggcgcttttccatc
ccagcatccggagatagactcatcgtctccaattccactgatcagcccataggtcttttc
ggagcatttgatacatcactccaaacactctcacaagtcaccaatgaccctgagattttg
aagcagaagtccaacatccccacgcatctagacatagcatctgtgctcgaaaccagccct
cgatcttttccatgggttttcctcacaaactccttctgcactttcggtggctccatacac
gctcagaaccttcaagcctttgcaaccgccgagttcaagagtggattttgttacatgaac
ctgctgataccgcttagcttcgacatcatcgatgcacacgccgattccttccgcggtttt
gtcgaacaactccctgatacgctaggtgcctatccttcgctcagcatggtactaaacgtc
atgctgcacgcagctacgcgcttcccagagattgttgcttcccccgttccaactatagca
ttcgatgctgaatcactgcaatttcatgtaactgataaacggggcgtccctggcatgtgg
aacatacttaaggcctgccgcgtgtatgagctcctctcgcttgctgcggatggcataggc
tgcgagtacatgctgtatcccgttggcgctgcgccccaatactccttctggaagaaatcc
atggaccacttcatatctgaccggtttgtggaattcttagccatgcagggtttgcttgct
agtgcacttgagcaggattacaaaacacacgacgcacgcgatgcattactcacagctcta
cagaacgcaggttacacgaatgttgtcgcaagagaacggagatttccaaacggccatgac
ccaagcaccgtctggttgaacctgaacgaggctcccatttcagagaagctaactgagctc
aaacgatacctcctggttggtcacagaagcgatgagattgcggacatcacacacaacgtt
caccagcacgtcttcgaggttcttaaaaccatgtctgtccagtttagcaagacaaccaac
gcttacaaccgcgcccgttttgaggttaaccatgaggtgatatggaatgcagagtacgga
cgcagttctcaacaaaacgctgagctcgaagcccttgttctatttctcaatagacagtcg
ctagagatcgaaaacattctgcgcagaacaactagtcccgttgttgtgacgaactggcag
cctgatgttcctcccgcagcacctgaaatcagcgaaggggagccaacgcatgcagtcgca
acaccaataactgaggcaccaacacatgcaactcctgttgaagttgtgaatttgccacca
acacgctcttattgggccgaaacactcgttggtgtgttaaccgcaattttgggaaccatc
ttcgccttgctcactcgggcgctcattcgcccaaagaggctgcggagaaaatccaccttt
ccctgggtgtcactagactctggagacgaagatgatgaccattctggtggaggaggaggt
agcccacaaacacccggcgggcagcccccagcctcgccagcacccggaactcaccagtcg
cgcttttccgtgcaagatatagcatcggacacgagcctactgagtgtggaccttgatgaa
gacacactctcccagtacgacgaaactttccagacaattcgtcgtgcgctcttcgagaac
agttttggagacatcctgcaaaactcagctcgctggatctccacactggaggcgatggct
cttgcagatggcaatgccccttacacgctccttgcgcagtaccttaacggaatcgaggag
gcatacacaaactttcgcaacacagggcatatctcccgtgcaacattgtcaggcttcttc
gttctggaggatagtctgcgtgcggctggcatagcttttgggggcacaacgcccacgcaa
actatacaaaaccagtctgctgactccccagcccgtcgatggaaaacacgctttgagcag
atcgcatgcgaactaggtgatgctagcatcaagtcgcttgcagatcttgcagacatcatc
gacactgagcgtgagagaggagacttaactcagtttgatgttctcgcagcttcctccata
agcagtctctgccgcgctgtccgtattatcagtgacacaactgatccaaacacacaacta
gctcttgtcgagaacgcaactgctatgcaaaacaacataaacgccatcctaggcacgaat
gttagcatccctttcctcagcgcaacgcgtcgcctgctcataacacgtcgcattcaagaa
gctggagcggagagccgctctggcgcaacgccagacaccatacagcagctcgccgatgct
gagctagcggaaattgtcagcgaggcaaacatgttcaatgagatggctgctagtcagaga
gatattgccaatgcaacacgcgaagctaccattcgtgagcatgtacttagtcctgttaat
gccttggccaatgttggcatggcggctgctttcttccgatctggtggtttgcgttcgagg
gcttttcatcccacaatgccaacaatgcctggtagtcctgccgccatagggcggccaatg
tttcaagcctttagaggacgagggcaccgtctcaatagacgttaa
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