Viruses: 9725465
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Entry
9725465 CDS
T40000
Symbol
ToChV_s2_gp2
Name
(RefSeq) Tomato chocolate spot virus; polyprotein
Virus
661101
Tomato chocolate spot virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
3A
Motif
Other DBs
NCBI-GeneID:
9725465
NCBI-ProteinID:
YP_003097231
RS:
NC_013076
UniProt:
C7EXM4
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Position
NC_013076:686..4279
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AA seq
1197 aa
AA seq
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MISSQVGQKMGPSNRAQEEASERLITQITAAVEAGNKNLLKKLGMGSYGVLYGSQEKRAM
ELFDPDDVTRITSLWSQFKHRFVESKDHANLFFHLYGVLFFMVPHVHSGEGRVKISLCSS
NDPISPVIQEKSLSLADGAQAVLMSPSITLPFLKRGPMFYYTLECENTRAQIPCSVVAIW
KQKIDTRSAVYSQQETMSWAIEALNRPQFFQDRQEAAQYIASVYSSGQSSQMALENRAFV
GERLGNTRMDVLSESSMTRSSSLRIPTLKVQSRRFPSMELPDVPNTSRLTMREETAHDED
TGGLFPVKKAQGFNMGVIWDNLGIDSFTHIDFPDDWTERTIAQQVQYILFDEASRGNVIV
PKHVSKREQHNIYKEHITEDNYVDILAAYGITKVGNLSRSLDWYDMSLHERVIALVHQRD
HQVYIMGDFTNPLPSFDCYDGLTIGERKLAEIKANFARQLSLESKKETAPKLAQVAGAGI
AESKPSESVGDSFVSTTSMKDNGEESPITITAEHIEDDTTPGDVIFDFGSDMDSNPAIDL
EMQQPVCVASNEFFNVGVFEFVWEKSKNVAEQVMSLALPAALFAKKKETSMGAQMLKYYD
AALIMYKVILYVSGVGAISGQLALVWDECNVLNRKKEFINIATLYASKHTLVSASQQQSE
EFCFTPTGIGKYVPLDEGTGATDLGSIRVFVTHPLSSATELSNVPCHIHLQCKVLSTNIL
QPPRLIAQSQFGMKPGQTYFPRFPTNQVLLHYNWGTAAAMGTTLVSIFSPSGIYESDGVL
QPSLLGNVARNCKWWTGTCVFEICIEKTLFHSGSLAIGLGTLNTKMSNAHDIFNMPHVVC
NLEMGRKFRFKCTVTNWNGKNLLSTGRKSSLPRPGHFSHLRLFATVMKPLVSTSVHLDSV
GVTVQLKCLENLVLGGTVSVKPIYGHWTKGKSAVDFLFSEMDMTQRKEIEKLRKDNVEQY
DAKGKQPVKQSQVNLSIREKFSYGAVQYFCMGWKDEERLLVIPCAPWSVRFEAQSAVKEA
ITCPFIDWCTSFCYWSGSLNYSIVVHRVQSSPNVGGILNVALDSSGYPFPAGLSKGNYVV
SAGGGSKWNFSYGVTTNIFSFTVQDDEFFCRRHTRMREFSKTQSRIMSLQDRLGNLIINL
PPVGLVSSIEILISPGPDFKLEVAQPPSANHEKFLGNMQTHTYQYTSDFSELRDFEV
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgatatcttcacaggttggtcagaagatgggcccaagtaacagggcgcaggaagaggct
tctgagcggctaatcacacagattactgcggctgttgaagctggaaacaaaaacctgctc
aaaaagctcggcatgggttcatatggggtcctttatggatcgcaggaaaagagagccatg
gagctctttgaccccgatgatgtcacacgtatcacgtcattgtggtctcagttcaaacat
cgttttgtagagtctaaagaccatgcaaatcttttctttcatttgtatggtgttcttttc
ttcatggtccctcatgtacatagtggggaggggcgtgtcaaaataagtttgtgttcgagc
aatgatcccatcagcccggtgattcaagagaagtccttgtcactagctgatggtgcacaa
gccgtgctcatgagtcctagtatcacattgccctttctcaagagaggaccaatgttctac
tacactctagagtgtgagaatacacgtgcacagataccttgttccgtggtagcgatatgg
aaacaaaagatagatacaaggagtgccgtatactctcaacaggaaactatgtcttgggcc
attgaagcattgaacaggcctcaatttttccaagatagacaggaggctgcccaatacatt
gcttcagtatactctagtgggcaaagttcccagatggccttggagaatcgtgcttttgtt
ggagagaggctcgggaatacacgaatggatgtactgagtgagagctccatgactcgtagc
tcttccctgcgaattccgaccctcaaggtgcaaagtaggcggtttccatccatggaacta
cctgacgtgcctaacacctcacgattaacaatgcgagaggaaacagctcacgatgaagac
actggtggattgtttccagttaagaaggcacaaggcttcaacatgggtgttatctgggat
aatctgggcatagactcctttacacacattgacttcccagatgattggactgagcgcacg
attgcgcaacaggttcaatacattctgtttgatgaggcttcacgaggcaatgtgatcgtg
ccgaaacatgtatcaaagagggagcagcacaatatttacaaggagcacatcactgaggac
aactatgttgatattcttgctgcatatggcatcaccaaggtaggaaatctctctcgttca
ttggattggtatgatatgtcgcttcatgagagagtcattgccctagtgcaccaaagagat
caccaagtgtacataatgggtgattttacaaaccccctaccttcatttgattgttatgac
ggtctcacaattggtgagaggaagctggcagaaatcaaggccaattttgcccgccagttg
agcttggagagtaagaaggaaactgcacccaaacttgcacaagttgcaggtgctggcatc
gcagaaagcaagccaagtgagtccgttggggattcatttgtttcaaccaccagcatgaag
gacaatggagaggaaagtccaataactatcaccgcagagcatattgaagatgatacaact
cctggtgatgttatttttgacttcggttcagacatggactcaaacccagccatagattta
gagatgcaacaaccagtatgtgtggcaagcaatgaatttttcaatgttggtgtgtttgag
ttcgtgtgggaaaagagcaaaaatgtggccgaacaagtcatgtcattggcactaccagct
gcattgtttgcaaagaagaaagagacatccatgggggcacaaatgctcaagtattatgat
gctgctctcatcatgtacaaggtcatactgtatgtgtccggagttggtgccatatcagga
caattggctttagtctgggatgagtgcaatgttctcaatagaaagaaagaatttataaac
attgccactctttatgccagcaagcatacccttgtttctgcatcccagcaacagagtgag
gaattttgttttacaccaacagggatagggaagtatgttccacttgatgagggtactggt
gccacggacttaggaagcatacgtgtgtttgtaacacatcccttatcaagtgccacagag
ttgtcaaatgtcccatgccatatccatttgcagtgcaaggttctctccacaaatatcctg
cagcctcctcggctaattgcacaatcgcagtttggaatgaagccgggccaaacatatttc
ccgcggttccccaccaatcaagttttgttacattataattggggaaccgctgcagcaatg
ggcactactcttgtgagcatattctcgccttcgggtatctatgagagtgatggtgtactg
caaccatccttacttggtaatgtagcgcggaattgcaaatggtggactgggacgtgtgtc
tttgagatttgtattgagaaaacgctcttccactcaggaagtttggccataggactcggg
acactgaacacaaaaatgtcaaatgcacatgatatttttaacatgcctcatgtagtgtgc
aatcttgagatgggccgcaagtttcgcttcaaatgcactgtcacgaactggaatgggaag
aacttgttgtccactggaaggaagagctcactgccgcggccgggacatttttcccattta
cggctttttgctacggttatgaagccacttgtgtccacatcagttcaccttgactcagtt
ggtgtcacggtgcagcttaaatgccttgaaaatttggtcctaggtggtacggtttctgtg
aagccaatctatggacactggacaaaaggaaagagtgcggtggactttcttttctctgag
atggatatgacccagcgcaaggaaattgaaaagctcaggaaggataacgtggaacaatat
gatgccaagggtaaacagccagtcaagcaaagccaggtgaatttgtccattagggagaaa
ttttcatatggtgcagtccagtatttctgcatgggctggaaggatgaagaaaggttgctt
gtaataccatgtgctccctggtcagtgcgctttgaagctcagagtgctgttaaggaggca
ataacctgtcctttcatcgattggtgtacatccttttgttactggtcaggcagcctcaat
tattccatagttgtgcaccgagttcagtccagccctaatgtcggaggcattctgaatgta
gctcttgactcctctggttatccatttccagcaggcctgagtaagggaaattatgtagtt
tcagcaggaggaggatccaagtggaacttttcctatggtgttacaacaaacatattttct
tttacggttcaagatgatgaatttttctgtaggagacacactcgcatgagagagttctca
aaaactcaatctagaataatgtctcttcaggataggctcggtaacttaataataaatctt
ccccccgtagggcttgtgagttcaatagagattctcatctccccgggtcctgacttcaaa
ctggaagtggcacaacctccttctgccaaccacgagaagtttcttgggaacatgcaaaca
cacacttatcaatatacctctgatttctctgagctcagagattttgaagtttga
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