Viruses: 984302
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Entry
984302 CDS
T40000
Symbol
OMVs1gp1
Name
(RefSeq) Oat mosaic virus; polyprotein
Virus
157837
Oat mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_1
Poty_PP
Peptidase_C4
Poty_coat
Helicase_C
ResIII
DEAD
Peptidase_C3
AAA_11
Peptidase_C62
AAA_19
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
984302
NCBI-ProteinID:
NP_659025
RS:
NC_004016
UniProt:
Q8UZ27
LinkDB
All DBs
Position
NC_004016:177..7199
Genome browser
AA seq
2340 aa
AA seq
DB search
MTSTGTFLAPETFYRNNVAKVKAIFHSNDTARVINAISGDFELVAFLVLSPAHLLKLEDT
LRKELNFTATLMASTDASFETIAVLQTALDGFKYHFGTTTLEKGWFSMMTHIHDCLEESS
SSAATALQEQVQKVGSLLLSGKNRIESCELSVLRLTARDFKIEYGLKGSYFIEHCDLPLH
LKQKLCGTTPKEFSWAKSKERPLFTIPKSMKFTPESFIVFFARVIPFMRNIIHTVSLMYW
SCVAVVNLPTVMSFLFRRQFTKYVAASFTKRSLYFLIISIVAVLWIVRTHINQKAKISLQ
ARNAPESEKKLMMLLASVVGVTYLFDYDIAETMGNCLHKISRLANYLMDDYQGIASKLTQ
ATYGLQAGDSTEEASTTLIKDMMSVTFQIVDEDEEEGVLEDNVGVSFRDWVATNTTAGRN
MSRPLQYPVRATYALTPTNAPNIAEEMADSTNCWSMVVGFTGSGKSTYLPVLYSNYIARK
KDRRQQILICEPTQAATENVWAGIAQNLGRAVVGRHEGWHKMGDHCIQVMTYGSALQCQA
AEPSFIDSFDAIFLDEAHDVKEHSLVFESLCDKSGSVRKFYVSATPRDGTVCPSAARKYP
LHEVSSVCDSYKKFISAQGQGDLLDATKHDSVLVFLKGRNECVKAAHAWNSAVIGEKKAF
SLSSDNFATDFTALTERLKTHKIIIFTTNIIETGVTLNVDCVVDFGTTMRPALNLHNKTL
KLESRRVTLNERKQRIGRAGRLKDGYAITCGDVDRTATVVSPDVVYGAALLSFVHNVPFY
MNGTFESSWLEGITKMQAQTMAMFKLPIFLTRDLVNPDGSVAKEFLDVLKKHQFVTSDMK
QAPNMRARQLFPSWASYYLLVQSMHYGEDKEVIPSHLRNASVPFSVSTLSKFDWAALAEA
CEKHRPSVVNCFRSTDEPMRVVTLQTNPTNILCSIRHLKGMQRSYERLIQNNQIVRQSIG
NSVTFKWFSPSKITADIDSNIRKCINNLTVVQTALSTMEQMLANNGQALATNDMQHKPTH
IIELQASCTLDDATLASALGIFKPQQNLFLLFCTKGIKILYVVFALILVQLLYKLYQFWK
AQSKARKETGLHETMAPDKATAVFNEIVQMDRATRKNANLDLIGEKAPFCFHFTDIEEMT
ASDIVELEGKGNKYRPREDARLMYSVRDEASMNEFNEKAREKRKNLARNAEPDRKKAYEK
RPYYNFYDLQVDSNILEAIFYTMEGDEFFRTENPNKDMHSIARRLTEFLQTQPIVGRNQR
KLLEETAEVVVKDNKGYAHRMEISQHDSETLKHNNKGKVGYAEHNGDFRQSSEAIVGEVA
LEAEFGPEIEPNVVLEAATQITLSQVGIDVAKNVGKLTIGTFSVNCYFYHDWIVAPAHIQ
ERSGGITIEMPDQTIHSTTDNINAHGVRRFKGLDMVAIRRPSAMRPRKKLIKAFALQEAT
IAQMVFVDNNGVRKFTQSDWIRIEADSGRWSHKISTIEGMCGCPVFDVGKNRLIGIHVAT
NLSTKRNEFQAFTQEVVDFINGPGTRVETGRWHFYRPDCGYKEGDAVFIKEQAGDDLQII
NNSIVGFGSDLKGQLVQPASQSTKNKFEKLFGGGNFQLIGEMNKGLIDKHIITGETDDVR
DFMREHPTFAWLEDFMNEYAPSDLSYTAYYKDLCKYNRGKHVLTFNPTELDAATKGMIKI
LEDAGLKPGTLRSAQHVISDIQWNTSAGPSYQGKKRDLCAHLTEEEVLDFAEVCRSEFLA
GHSVGVWNGSLKAELRTIEKVEAQKTRVFTASPITSLMAMKFYVDDFNKAFYTTNLVAPH
TVGINKFSRGWEKLHNKLDRPGWLHGSGDGSRFDSSIDPFFFDVVKVIRKHFMPEEHHVA
IDLIYEEILNTTICLANGMVIRKNVGNNSGQPSTVVDNTLVLMVAFLYAYIHKTGDVDLS
LMDSRFVFVCNGDDNKFSISPEFNEQFGHDFSPELSELGLTYEFDEITTDICENPYMSLT
MVRTPFGIGFSLPVERIISILQWAKRGGVLHSYLAGIAAAIESFNTPKLFKSIFSYLIWL
TETHRDELLASMTSTANALPIPSMLDIYQLHYGGSNIVLQASTGEKAKTGDLTATAPAPF
VTHPDDEDEGKITRGPGQALTEVGKTWSMPKVTLKHSGPKFKIPLNKLATIPISALEHNN
SIANESERKAWEDGVRTDLGITDDDKWYNTLIPFLGWCVNNGTTDKHKESQIMQIDNGTG
SMSEVALSPFIIHGRINGGLRRIMRNYSDETVFLIGSKRVKMSMKFSMKHGSHVNPAYSF
DFFVPRPWMNTQDIEISKQVRLAALGTGTYNSMLTSDTANLRKTTHHRVLDSDGHPELTP
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaccggaactttcctagcccctgagaccttctaccgtaacaatgtggccaag
gttaaagccatattccatagcaatgacaccgcacgtgttataaatgccatatctggtgac
tttgagcttgtagcttttctggttctcagtcccgctcacctcctgaagctcgaagacaca
ttaagaaaggaactgaatttcacagcaactctcatggcaagcactgatgcgagcttcgag
accattgccgtgcttcaaacagcgcttgatggcttcaagtaccactttggaacaaccact
ctcgaaaaggggtggttctccatgatgacacacatccacgactgccttgaagagagttca
tcctccgctgccaccgccctccaagagcaggtccaaaaagtaggctcactactactaagc
ggaaaaaatcgcatcgaaagttgcgaactatctgtcttacgccttacagcgcgagatttc
aagatagaatatgggttaaagggttcctactttatcgaacactgcgatttgccactgcac
ttaaaacagaaactctgtggtaccacaccaaaggagttttcctgggcaaaaagcaaggag
cgcccactattcactataccaaagtcgatgaagtttacgccagaaagctttatcgttttc
ttcgctcgggttatccctttcatgcgtaatatcatacatacagtctctcttatgtattgg
tcgtgtgttgcagttgttaacctacctacagtcatgtccttcctttttagacgtcagttc
accaagtatgttgccgctagtttcaccaagcgctcactttactttctcatcataagtatt
gttgctgttttatggattgtacgcactcatataaaccaaaaagcaaaaatatctcttcaa
gctcgcaatgctcctgaaagcgagaagaaactcatgatgttacttgccagcgttgttggt
gtaacatacctctttgattatgacattgctgaaacaatgggcaattgtctacacaaaatc
agccgacttgcgaactatctcatggatgactaccaggggattgcctcaaagctcacgcaa
gccacctacggtctccaagctggtgactctactgaagaggccagcaccaccctcattaag
gatatgatgtctgtaactttccagattgttgatgaggatgaggaagagggtgttctcgaa
gacaatgttggagtctcatttcgtgactgggttgctacaaacacgaccgctgggcgcaac
atgtccaggcccttacaatatcctgtgagagccacatatgccctaaccccaaccaacgct
cccaacatcgctgaagagatggctgattccacaaattgttggtccatggttgttggcttt
actggttcaggtaaatcaacttatcttcctgttctttattcgaactacatcgccaggaag
aaggatcgccgccagcaaattctaatctgcgaaccaactcaggctgccaccgaaaatgtt
tgggcaggcattgctcaaaatctcggtagagctgttgttggacgacacgaggggtggcac
aaaatgggtgatcattgcatacaagttatgacatacggttctgcgctgcagtgccaagca
gccgagccaagcttcattgacagctttgatgccatctttttggacgaagcccacgacgta
aaggaacactctcttgtctttgagagcctttgcgacaaatctggctccgttaggaagttc
tatgtctctgcaacaccgcgggacggcactgtctgcccaagtgctgctaggaaatatcct
ctacatgaagtttcaagcgtgtgtgattcttacaagaagttcatcagcgcacagggtcag
ggtgatttgcttgatgccacaaaacatgattccgttctcgttttcctgaagggaaggaac
gagtgcgttaaagctgcccacgcttggaatagcgcagtcattggggagaagaaggcattt
tcactatcaagcgataactttgccacagactttacagcgctcaccgagagactcaaaaca
cataaaatcatcatattcacaacgaacatcattgagacaggtgttacccttaatgttgac
tgcgttgttgactttggcacaactatgcgaccagctcttaatctccacaacaaaactctt
aagcttgaaagcagacgcgttaccctgaacgagcgaaagcagcgcatcggaagagctgga
aggctaaaggatgggtatgccatcacatgtggtgacgttgatagaaccgcaaccgttgtt
tcaccagatgttgtgtacggggctgctttgcttagtttcgtgcacaacgttcctttctac
atgaacgggactttcgaaagctcttggctcgaaggcataacgaaaatgcaggcacaaacg
atggcaatgttcaaattacccattttcttgacacgcgacctagttaatcctgatggttct
gtagccaaagagtttctggacgtgttgaaaaagcaccagtttgtaactagtgacatgaaa
caagctccaaacatgcgcgcacgccagctctttccatcctgggcatcgtattatctactg
gtccagtcaatgcattacggtgaggataaggaggtgattccctcgcatctgcgcaacgct
agtgttcctttctctgtttcaacactatccaaatttgactgggcagccctcgccgaagcc
tgtgagaaacatcgcccgtcggtagtgaattgtttcagaagcactgatgaacctatgcgt
gttgtaactctgcaaacaaacccaacgaacattttatgcagtataaggcaccttaaaggc
atgcagcggagttatgaacgtctcatacaaaacaatcagatcgttaggcagtcgattggc
aacagtgtcaccttcaaatggttctcccctagcaagataactgccgacattgactccaac
atcagaaaatgtatcaacaacctaacagttgtgcaaactgctttaagcaccatggaacag
atgcttgccaacaatgggcaggctcttgctacaaatgacatgcaacacaaaccaactcac
ataatagagttgcaagccagctgcacgctagatgatgctactctcgcatcagctcttgga
atcttcaaacctcagcaaaatctgtttcttctcttctgcaccaaagggataaagatcctt
tatgtagttttcgctctgattttggtgcagctgctttacaaactttaccagttctggaaa
gctcagagcaaagcaaggaaggaaactggcttgcacgaaaccatggcgccggataaagca
actgctgttttcaatgaaatcgtgcagatggatagagccaccaggaaaaacgccaatctg
gacctcattggtgagaaagcacctttttgctttcacttcactgatatagaggagatgact
gcgagcgacatcgttgagctcgaagggaagggcaacaaatatcgaccacgcgaggacgca
cgcctcatgtactcagtgagggacgaagctagcatgaacgaatttaacgagaaagctcgt
gaaaagaggaagaaccttgcacgtaatgcagagccggatcgcaagaaagcatatgaaaag
cgcccctactacaacttttacgatctccaagttgatagcaatatactggaagccattttc
tacaccatggaaggtgatgagttcttccgcactgagaacccaaacaaagacatgcattcc
atcgccaggcgcttaactgaattcttacaaacgcagcccattgttggcaggaatcagcgc
aagcttctcgaggaaaccgcagaagttgttgtcaaggacaacaaaggatatgctcaccgc
atggaaatctcccagcacgattcagaaactctgaaacacaacaacaaggggaaagttggc
tatgcggagcacaacggtgactttcgccagagcagcgaagcaattgtcggtgaagtggct
ttagaagctgagtttggtcctgagatcgagccaaacgtggttcttgaggccgccacacaa
atcactctttcccaagtcggcattgatgttgcaaagaacgtcggcaagttaaccattggc
acattctcggttaactgctatttctatcatgattggattgtggccccagcacacattcag
gagcgctctggtggcatcaccatagagatgccagatcaaaccatacatagcacaactgat
aacatcaatgcacatggtgtgcgcagattcaagggccttgacatggttgccattcggcgc
ccaagtgctatgagaccacgaaagaagctcattaaggcatttgctctccaagaagctacc
attgctcaaatggtctttgttgacaacaatggtgtgcgtaagttcacccagtcggactgg
atcagaattgaggcagactctggacgatggtctcacaagatctcaactatcgagggcatg
tgcggatgccctgtctttgatgttgggaagaacaggctcattggaatccacgttgcaaca
aacttgtcaactaagagaaatgagttccaggccttcacccaggaggttgttgatttcatc
aacgggcctggaactcgtgttgaaaccggtagatggcatttttaccgccccgattgtggt
tacaaggaaggcgacgcagttttcatcaaggaacaggctggagacgatttacaaatcata
aataattccatcgttggttttggtagcgatctcaaaggacagcttgttcaaccagcgtct
caatcaactaagaacaaatttgagaaattgtttggcggtggaaatttccagctaattggt
gagatgaataagggcctcattgacaaacatatcatcacaggcgaaaccgacgacgtccgc
gattttatgagggaacatcccactttcgcttggcttgaggacttcatgaatgaatatgca
ccaagtgatctgtcatacactgcatattacaaagacctctgcaaatacaatcgtggcaag
cacgtgctaaccttcaaccccaccgagcttgacgcagcaaccaaaggaatgattaagatt
cttgaggacgctggactaaagccaggaactttgcgctcagcacagcatgttatctcggac
atccaatggaacacttctgcaggacctagttatcaaggaaagaaacgcgatctatgcgca
cacttaactgaggaggaggttttggactttgcggaggtttgtcgtagcgagttcttggct
ggacactctgttggcgtgtggaatggttctcttaaagctgaacttcgaacaattgagaaa
gttgaggctcagaaaacgcgtgttttcacagcctcacccatcaccagcttaatggccatg
aagttctatgtggatgattttaacaaagccttttacacaacgaatctcgttgctccacat
accgttggcataaataagtttagccgtggttgggaaaaattgcacaacaagctggacaga
ccaggatggctacacgggagcggcgatggttcacgtttcgacagttccattgatccattc
ttctttgatgttgttaaggtgattcggaaacatttcatgcctgaagaacatcatgtagct
attgatctcatttatgaggagatcttgaacaccacaatatgccttgcgaatggcatggtt
attcgaaagaatgttggcaacaatagtgggcagcctagcaccgttgtcgacaacactctc
gtgctcatggtggctttcctgtacgcatatatccacaaaactggtgatgtggatctctca
ctcatggacagcagatttgttttcgtctgcaatggtgatgataacaagttctctatttcg
ccagaattcaatgagcaatttggtcacgatttctcccctgaactctcagagcttggtctt
acttacgagtttgatgagatcacaactgacatatgtgaaaatccctacatgtccctgacc
atggtacgaactccttttggaattggtttctcgctccctgttgagagaatcatttccata
ctgcagtgggctaagaggggcggcgttctccattcatatttggccggcatcgccgctgcc
attgaatcgttcaacacgcccaaactcttcaagtccattttctcgtacctcatctggctc
acagagacacaccgcgatgagctacttgcctcgatgacttccactgcaaacgctttgcca
ataccatcaatgcttgatatatatcaactgcattatggaggaagcaacatcgttctgcaa
gcatcaactggcgagaaggctaaaacgggtgatctcactgcaacagcgcctgcacctttt
gtcactcatcccgatgatgaggatgaagggaaaataactagaggaccaggccaggcactg
actgaggttggcaaaacctggtccatgccaaaggtgactctgaaacactctggtcccaaa
ttcaaaattcctctcaacaaattggccactataccaataagcgctcttgaacataacaat
tctatagccaatgagtctgagaggaaagcatgggaagatggcgttagaaccgatcttgga
atcactgatgatgacaagtggtacaacactctgatccccttcctcggatggtgcgtcaat
aatggcactaccgacaagcataaagaaagccaaataatgcaaatagacaatggaacagga
tcaatgtctgaagttgcactatccccatttattatacatggaagaataaatggagggctc
cgaagaataatgagaaattatagcgatgagacggttttcctcatcgggagcaaaagagta
aaaatgtcgatgaaattttcgatgaaacacggatcccatgtcaaccctgcatattcgttt
gatttctttgtccctcgtccttggatgaacacacaggacattgagatctcaaagcaggtc
cgtcttgcagcacttggaactggcacgtataacagcatgttaacgtccgacactgccaac
ttgcgcaaaacaacccaccacagggttctggattctgatggacatccagagcttacacct
taa
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integrated database retrieval system
