Viruses: 984363
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Entry
984363 CDS
T40000
Symbol
RNA2, SMoVsRNA2gp1
Name
(RefSeq) Strawberry mottle virus; polyprotein
Virus
167161
Strawberry mottle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Other DBs
NCBI-GeneID:
984363
NCBI-ProteinID:
NP_599087
RS:
NC_003446
UniProt:
Q8UYV8
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Position
NC_003446:103..4461
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AA seq
1452 aa
AA seq
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MFLFVLYACLILYTLFVGFHFFHPRACAWVKRSVTGREENLDFILKARYINREEFFVCVS
TIIIWIVLRHCWTFLSHVVLVVLPKIFSFVLSSTKMASRDIQEAYHKAAKEFNSGASSIG
MAIEHAKSKNWEVAPDKCEKAIKELLKKDSLYTTHGVKTLLHIKKIPKTVVGHFDTGFVP
AVNTTNSKQPSISPIPLTPYVSKHVSRIEAAKSKFTQGVGGHISGYIPRPPSAIITISVV
SLKSKSLVSQSNAGITLVLGLDGRAQEPQDAILGGHLHFAKDSNLATSLFFPNLSLTSEE
EKLDSCVQVWTSAQGYNLTSGFASSTNISMIGEVSADAVATSMLVPMRQHIEARKFETLC
HGGLPIHPYRATENKIDTVELDWTSTSTSMEFDSSVDGVSLWKPSRTNGTTSLRFTGLKM
NSVKEDEELHFSDIDEGFNPPNPRERTRAYEEGLPEDIAETQDLLDGQERLIGEACVLSR
TFTLPDVVDNCQLIGVINLFEDTDVANSGEPLLANLRTATIFIPRIQVRVRYSLPSAYNC
PVIVTWDEARCIVEVTDTIDLTQLPHIIVTPNKSMQESSMDLSLNGITGTYSLARVISRR
AGNLLVSCTKHDFAEMVGEASVTIEAWLMPGTVIGKGIKRRPAPERPILNLDLVENYHTP
LLEGPTDLGSVILDSNTERYKCFSLFVKPGVGAVTDDRMTTKGSTISSVCSHWAMWSGTA
VVGVSISARSSVAGQMTVYTVPTGTFVHDINRSVCNQWERRIIKFNGSDHHEITSSANSW
LGGCSTMGEAFMGSKDQNGSCMMFVIFIDDPPTSCAGYDSSVQVFFSLKRLENLNLFERI
TPQIYRASQPSKALVQRKPWVERVVKTAPTGAVEQNFGVQPTIFYRMYTIRNIKRDKPVT
WILPFSIAEPLRSNWKNCKVTNYEHLEKGKDEEPLLIIDTTNPYRLLTQGFCYFSGEMQA
SVSVTSTKKKAGSLVVGRFKSPYFTKEIGCGQKDADIFGGGLMETASLLPGNVVYLTQPA
RPFVRSSCRPDVEKSHQATLDVPSYICIIVPANSDITEIEVGFNMNGPMELFGHALPQPV
DLPKSQTHGYLPALTVLDVKPAFPFGWWDMVNERAIKLLSRQMTPSLDVAKLKTSRGPMK
DDIFRMYHVFEMAGIAEKSHFVSFLRPNFTPHQGYAINLQIWVGDSRDKMFEVIWRFDSS
MPQGYITTYVTDGNYEGWNLNTCWKADFDRFKSRERFNLSYTRDKGRIYLFDHNNVIGYI
KDFKPTLHCVFGWEYQLDTNVIRVPNQYQPYSFNPSGGYVRPEMDAMEQKPHLLHIQHTN
FQSNTHLYDRCVNYDHSKGPVRFSDCGGFDPSLINPAVEQSDRGSLQKGEEIDDTVDHGP
TELLLSDVNSGVPQVPLHAKISTGDSSQGESEGPIDYESRREPVERNRVGISNRKKHRRG
RPKPNHPGALGQ
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtttgtgttgtacgcttgcttgatcctctacactctcttcgttggatttcac
ttcttccatccgagggcgtgtgcttgggttaagcgtagtgtcacagggcgcgaggaaaat
cttgactttatcttaaaggcaagatacatcaatcgcgaggaatttttcgtttgcgtttca
actatcattatttggattgtccttcgtcactgctggacttttctctcccatgtcgtttta
gtcgtcctaccaaaaattttttcctttgttctatcttcaactaagatggccagtcgagat
atccaggaggcctaccacaaggccgccaaggagttcaactctggcgcttccagtatagga
atggctattgaacatgccaagtccaaaaactgggaggtggcaccggataagtgcgagaag
gctatcaaggagcttctcaagaaagatagcttatatacgacccatggggtcaaaaccttg
ttgcacatcaagaaaatacccaagactgttgtgggtcattttgatacaggttttgttccc
gctgttaataccaccaactccaaacagccctcaatatcacccattcctttgacaccttat
gtgtcgaaacatgtttcaagaattgaggccgcaaaatccaaatttactcagggcgttgga
ggccatatctccggatatatcccccgaccaccgagtgccataatcaccatcagcgtggtt
tccctcaaatccaaatctttagtttcccaatccaatgccggtataacacttgtgttgggt
ttggatgggcgagcacaggaacctcaggacgctattctcggtggacacttgcactttgct
aaggattccaaccttgctacttctttgtttttcccgaacttgtctttaacatctgaagag
gaaaaactggattcctgtgttcaagtatggacttctgctcagggctataatttaactagt
ggtttcgcttcctccacaaacatatccatgattggagaagtttctgcggacgccgttgcc
acttccatgttggtccctatgagacaacacattgaggcaaggaagtttgaaacattgtgc
cacggtggtctcccaatccatccctaccgtgcgacggaaaataaaattgacactgttgaa
ttggattggacttcaacttccacatccatggaatttgattctagtgtcgatggtgttagc
ctgtggaaaccctcacgcaccaatggaacgacttcactgcgtttcacaggtctcaaaatg
aactctgtcaaggaggatgaggaactgcatttcagcgatattgatgaaggttttaatccc
ccaaatccgcgtgaaagaacccgagcttatgaagaaggtttgcccgaagatatcgcggaa
acccaggatttgcttgatggacaggaaagactcattggtgaggcgtgtgttctatctagg
acattcactcttcccgatgttgttgataattgtcaattgatcggtgttatcaatctcttt
gaggatactgatgttgctaattcgggggaaccattgctagccaatctacgcactgccaca
atttttataccaagaatccaagtgcgtgtgcggtattcgcttccgtcagcctacaattgt
ccggtcattgttacttgggacgaggctcgctgtattgttgaggttactgacacaattgat
ctcacccaactccctcacattatagtgaccccaaacaagagcatgcaggaatcctccatg
gatctctctttgaatggaatcacaggaacttactcccttgctagggtgatttcgaggcgt
gcgggaaatctcctcgtctcatgcaccaaacatgattttgccgaaatggttggcgaagca
tcggttaccatcgaggcttggttgatgccgggtactgtcatagggaaaggtattaaacga
cgccctgctccagaaaggcccatccttaacctggatcttgttgaaaattaccacacacca
cttctggagggacctacggatcttggaagtgtcattttggactccaacacggagcggtac
aaatgtttttctctcttcgtgaaacccggtgttggagcagttactgatgataggatgacc
actaaaggttcgactatctccagtgtctgttcccactgggcaatgtggtcgggtactgct
gtcgttggggtctccatttcagccaggagtagtgttgcgggccaaatgaccgtgtatacg
gtacccactgggacttttgttcatgatatcaaccgctcagtctgcaaccaatgggagcgg
cgaatcatcaaatttaatgggtctgatcaccacgagataacctcttctgccaattcttgg
ttgggtggttgttctaccatgggagaagctttcatgggttcaaaggatcagaatgggagc
tgtatgatgttcgtgattttcatagatgatcctccgacaagttgtgcgggttatgattcc
agcgttcaagttttcttctctctcaagagacttgagaacttgaatctcttcgagcgcatc
acaccgcagatttatcgtgccagccagccttctaaggcgcttgtacagcggaagccctgg
gtggaacgtgtagtcaagaccgctccgacaggtgctgttgagcaaaactttggtgttcaa
cccaccatcttttaccgcatgtacaccataaggaatattaagagagacaagcccgttacc
tggatcttacccttctctattgctgaaccgcttcgttcgaactggaaaaattgcaaggtg
acgaactatgagcacctggagaaaggtaaggatgaagaaccccttctcataattgatacc
accaatccttatcgcttattgacgcagggtttttgctacttctcgggggaaatgcaagct
tcagtgagtgtcacctccactaagaagaaggcgggttccttggttgttggaaggtttaag
agtccctatttcacaaaagagatagggtgtggtcagaaggatgctgatatctttggtggt
gggcttatggaaaccgcttctttgttgccgggcaatgtcgtctatttgacacagccggcc
agaccgtttgtgcgctccagttgtcggcccgacgttgaaaaatcccaccaagctactctg
gacgtcccatcttacatttgtattatagtcccggcaaattctgacatcacggagattgag
gtaggcttcaatatgaatggacctatggaactctttggccacgctcttcctcaacccgtg
gatttgcccaagagtcaaacccatggttatttgccggctctcactgttctggatgtgaaa
cccgccttcccttttgggtggtgggacatggttaacgagagggctataaaactcttgagt
cgccaaatgacgccttctctggacgttgcgaagctcaaaacatcacgagggcctatgaag
gatgacatctttaggatgtaccatgtttttgaaatggcaggaatagctgagaagagccat
ttcgtgagtttcttgagacccaacttcacacctcatcaagggtatgccatcaacctccaa
atatgggttggagattcacgggacaaaatgtttgaggttatttggcgtttcgattcttcc
atgccccaaggatacattaccacgtatgtaacagatggcaactacgagggttggaatttg
aacacgtgttggaaagctgattttgatcggttcaaaagccgtgagcgttttaatctgagt
tataccagggacaaaggccgcatatacctctttgatcacaataatgtcattgggtacatc
aaggatttcaagccaacccttcactgtgtctttggctgggaatatcaacttgacacgaac
gtcattagagtacccaaccagtatcaaccttactctttcaacccttcgggcgggtatgtt
agaccagaaatggacgctatggagcagaaaccccacttattacacattcagcacaccaac
tttcaaagtaacacacatctttatgatcgttgtgtgaattatgaccattccaagggtcct
gtccggttcagtgattgtggtggttttgatccgagcctaatcaacccggccgttgagcag
agtgatcgaggtagtctccagaaaggggaagaaattgatgatacagttgatcatgggcct
actgagcttctattgtccgatgttaattcaggtgtcccacaagtacccctacatgccaag
atttctaccggggattcttcccaaggagaaagcgaggggcccattgattacgagtctaga
agagagcccgttgagaggaacagggttggaatctctaatcgaaagaagcacagaagaggt
agaccaaagcccaaccatcctggcgcccttggtcagtga
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