Viruses: 991048
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Entry
991048 CDS
T40000
Symbol
SBWMVsRNA1gp1
Name
(RefSeq) Soil-borne wheat mosaic virus; 209 kDa readthrough protein
Virus
28375
Soil-borne wheat mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
Vmethyltransf_C
Vmethyltransf
Viral_helicase1
DUF7605
Motif
Other DBs
NCBI-GeneID:
991048
NCBI-ProteinID:
NP_049335
RS:
NC_002041
UniProt:
Q89249
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Position
NC_002041:102..5588
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AA seq
1828 aa
AA seq
DB search
MPIDSSSILGIISEEDVIRAAISTSATKFGSQLHSTVCDHVKETYLDAVERQKVKKKIDV
RRDLSQEQLQLLNDLYPERHIVSSNCERGTHSFAAASRKIETDLLLSRIPKRSWVYDIGG
NWATHVKRNDGRKVHCCCPTVDIRDSARKTVRWASIEKYLDEKEEIPPEIGERIKRLQAD
EDRIYANLKSEKAQPEDLDGKWYCGNRFEDCVFRADRAYAMAIHSIYDIDLSDLANALEE
KRIKVMSGTFLFSVDLLLGKKSGTLPTMDGFFEVEDGYVKYGFHNDTNPGYKHNLNQLMK
YLTKTFVVAKGGTIYYLELTEQRGDVMFFTMTDATEARMNGVVADESFKCIPIDNKDEVV
FPIFEVDQKTDALVFSEILLSRDFVQRAIEYTGRLKPAQLTSDNVNTYLTSTNNTIIIGG
SSKKNATKVDATLIQQITTTLIVWTELMNQRQKRVLEKLRMQMKDDVDFMTLAHATFLKM
FGKVSYYQRALRCFANWISYVHGADAIQFRNVPLYAEVTDRIKLWKNYAPNQGFVLDLEE
LDVKIKLHEITEREKRDVSRCIVSGKLGELSSVDNTECGAVLDGKDYKDSRRKTTFEDLL
DGEVATNFLDNWCDKTDHFNFSRSDAVSKYAWGMKLLKGVWEFLLPPLHFAPVYVDAEQA
RIRLNAEIVTVVEHAVTESNVGLTGVEKAEFADAMSFLVGAAKHLEKRKEVAQQAVVEAV
EAVRELRKVHSPADVCNAVDLWSAFEKDLDDDDETGTTATIVEKGKAVCDDDVQVVLCGS
SSTSSVEEVSKEAELFVETIESQASSVTETSDVTTEVAASSSDESVMSEVPEKSWASVAE
DESDDSYYLRSMIISDKVQKSALPKRPDFSKYSTLQQKAKQEALWYLQCKIVSDRTTLRS
IIDDHLRGMFHNGNCELPKDSAFLDYTVDNCGTWMYGKPSRPGHSYGVGFSLDTKQRITK
CELVKLMWNRDCRGQMNQKPVNTRAFQYLLLSDLSFMMNELVIYRNLQQVVKKKERTKQA
RITLRDGVPGCGKSTWILNNANPMKDMVLCVGKEATEDLKEKFMKKHKCAESDLKRIRTV
DSFLMHDYDKFRAATVHFDEALMAHAGIVYFCADILGAKKVICQGDSQQIPFINRVESIT
LQYAKLAIDETEYVRLTYRSPVDVAHYLTKKSWYSGGRVTTKNSVLRSMKVVGPRDAKPM
TSVHCVPYHRDAQYLTFTQSEKADLYKALRAKGPVEVNTVHETQGKTFDDVIVVRLKTTE
NEIYPGGRKGQPYEIVATTRHRRSLVYYTAIEDRLFEDISDMQDVMESKLMKNLCSELTK
XRFGSKYESILICDREVRVPDVGTPVIIQDFYDRVLPGNSTMDSHFDGYEVSTSDISIEL
ENCTVQPNKNVKVWQDKRGLVPVLRTAMPPKRQNLPVEAMLALKKRNMAAPKLQEAVNEF
EVIERTVNRAKEIFFDTSLIDDSEVSTRESNLRWWKRQSTTAKAQLKKETRLLHELDLCY
YNYCIKGDEKPKMDRSPQHEYGALQTVVFPDKIVNALFGPAMKEINERIRLALKPHVVYN
SRMNAEELNRTVEFLDPEEDFNAFEIDFSKFDKSKTSLHIRAVIELYKLFGLNDLFALLW
EKSQCQTKIRDFVNGITAYLLYQQKSGNCDTYGSNTWSAALALLESMPLEKAKFMIFGGD
DSLILFPKHLTIEDPCRRLASLWNFDCKLFDFKHNMFCGKFLLKVGDRFKFAPDPMKLIT
KLGRKDIVDGRLLSEIFVSVGDNYRSYRDYRILEQLTYALRERYRTTEDPTAALVALKKY
IFDFKLWASMFNYKGEFVECRVDRNFEW
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgacagcagttcaattctggggatcataagcgaggaggacgtgatcagggca
gctatcagtactagtgcgactaaatttggttctcagttgcacagtactgtttgtgatcat
gtgaaggagacttatttggatgcggttgaaagacaaaaagtaaaaaagaaaatagatgtg
cgaagagatctttcgcaggagcaattacaattgttgaacgatttgtatcctgagagacac
atcgtttccagcaactgtgaacgtggcacacatagttttgccgcagcttcgagaaagatt
gaaacggatttgttgctgagcaggattccaaaaaggtcatgggtatatgatattggtggc
aactgggcaactcatgttaagcgcaatgatggaaggaaagtgcattgttgctgtcccacc
gttgacataagggactcggccaggaagactgtgagatgggcatctattgaaaaatattta
gatgagaaagaagagattccacctgagataggagagcgtataaaacgtttgcaggccgac
gaagacaggatatacgctaacttgaaatcagaaaaagcacaacctgaagatcttgatgga
aagtggtattgtggtaacaggttcgaggactgcgtttttcgcgcggacagagcttatgcg
atggctatccacagcatatatgacatcgatttgtctgatcttgccaacgcgttggaggag
aagcggatcaaggttatgagtggtacgttcttattctcagtggatttgctgttgggaaaa
aagagcggtactttgccgacgatggacggtttctttgaagttgaagatgggtacgtgaag
tatggtttccataacgatacgaatccaggatataagcacaatcttaatcaactcatgaaa
tatcttaccaagactttcgtcgttgctaaaggtggtaccatttactacttggagcttaca
gagcagaggggcgacgtgatgttctttactatgacagacgctactgaggcacgtatgaac
ggtgttgtggcagacgaatctttcaaatgcattccgattgataacaaagatgaagttgtg
ttcccaattttcgaagtagatcagaagacggacgctttggtgttttctgagatattactg
tcgcgtgattttgtccaaagggcgatagagtacacaggcagattgaaaccggcgcagctt
acctctgacaacgtgaatacgtatcttacatccacaaataacacgattattattggaggt
tcttctaagaagaacgccactaaagtggatgcgacgcttattcagcagatcactactact
ttgatagtgtggacggagttgatgaatcagcgtcagaagagggttttggagaaactgagg
atgcaaatgaaagatgatgtcgatttcatgacattagctcacgctacgttcttgaaaatg
ttcggtaaagtgagttactatcagagggccctgaggtgttttgctaattggatatcatat
gtgcatggtgccgatgctattcagttcaggaacgttccactttatgcggaagtgactgac
cggattaagctttggaaaaattatgcaccaaatcagggttttgttctcgatttggaggag
ctggatgttaagatcaaactgcatgagattactgagagagagaagcgcgatgttagcagg
tgtattgtttctggaaagttgggtgagctttcttccgtcgataacaccgaatgcggtgct
gttttggatgggaaggactacaaggatagcagaagaaaaaccacttttgaagacttactg
gacggtgaggtcgcgaccaattttctggataattggtgtgacaaaaccgatcatttcaat
ttctcgcgtagcgacgctgtttctaagtatgcttggggtatgaagttactgaagggtgtg
tgggagtttctactgccaccactacacttcgcgcccgtttatgttgatgcggaacaagct
agaatcagactgaacgcagaaattgtgaccgtggtcgaacacgctgttactgaaagcaac
gtgggtctcaccggagttgaaaaagctgagtttgcggatgctatgtcttttttggtcggt
gcggccaaacatttggaaaagaggaaagaggttgcacaacaagctgttgtggaggctgtc
gaagccgtgcgtgaacttcggaaagttcactcacctgctgacgtgtgcaatgcggttgat
ctttggtcggcttttgagaaggaccttgatgatgatgatgaaactggcacaactgcgacg
attgttgagaagggcaaagccgtgtgcgatgatgacgttcaagtagtgctgtgtgggagt
tcctctacttcttctgtggaagaagttagtaaggaagcagaactgttcgttgagaccatt
gaaagccaggcaagttctgtgactgagacgagtgatgttacaactgaagtcgctgcatcg
agtagtgacgagtcagttatgagtgaggttcctgagaagtcatgggcgtcagttgctgag
gacgaaagcgacgatagttactatttgaggtccatgatcatttcagacaaggtacaaaag
agtgctttaccaaaaagacctgatttttcaaaatacagtactcttcaacagaaggcgaaa
caggaagctttgtggtacttgcaatgcaagatcgtttctgacaggactacattgaggagc
ataattgacgatcatttgcgcggcatgtttcacaatggtaattgcgagttgcctaaggat
tcagcttttttggactacactgttgataattgtggtacctggatgtatgggaagccgtcg
cgtccgggtcacagttatggtgttggtttttcactggatactaagcaacgcattactaaa
tgtgaactcgtgaaattgatgtggaatcgggattgcaggggtcaaatgaaccagaagcct
gttaacacaagggcttttcaatatttgctactgagtgatttgagtttcatgatgaatgag
ttggtcatttatcgtaatttgcaacaggtagtgaagaagaaagaaaggaccaagcaagct
cgtattacattgagggatggtgttcccggctgtggaaaatctacttggattttgaacaac
gcaaatcctatgaaggatatggtgctatgcgttggtaaagaagccactgaagatctgaag
gagaagttcatgaagaagcacaaatgtgcagagtcagatttgaaaaggatcaggactgtt
gactctttcttgatgcatgactatgacaaattccgtgctgctaccgtacattttgacgaa
gcgttgatggcacacgcaggaattgtgtacttctgtgctgacattcttggggcgaagaaa
gtgatttgccaaggagattcacaacaaatacctttcataaatcgtgttgagtcaattact
ttgcagtatgcgaaacttgcgattgatgagacggaatatgtgagacttacatacaggtcg
ccagttgacgtggcacattatcttaccaagaagtcttggtacagtggcggtagggttaca
acaaagaatagtgtgttgagatcaatgaaggtcgtaggtccgcgtgacgcaaaacctatg
acgtcggtgcattgcgttccttaccatagggacgcacagtacttgacgtttacacaatct
gagaaagccgatctgtacaaagcgttgcgtgcgaaaggacctgtggaggtgaacactgtg
catgagacacaaggaaaaacttttgacgacgttatcgttgttagactgaagaccactgag
aatgaaatttatccgggtggaaggaagggacaaccttacgagattgtggcaaccaccagg
cacaggaggtctttggtttactacactgctattgaggacaggttattcgaagatatcagc
gacatgcaggatgtcatggagagtaaattgatgaagaacctctgttctgagcttactaaa
tgacggtttgggtcgaagtatgagtctattttgatatgtgatagagaggtaagggtacct
gacgtaggaacccctgtgattatacaggatttctatgacagggtattacctggaaattcc
acaatggattcacacttcgacgggtacgaagtttctacttccgacattagcatagagctc
gaaaattgcactgtccaacccaacaaaaatgttaaggtatggcaagacaagaggggtttg
gtgcctgttttgagaactgcgatgcctcctaaaaggcagaatctgcctgtagaagctatg
ttagctttgaagaagcggaacatggcagcgcccaagttgcaagaggcagtcaatgaattt
gaggtgattgagcgaacagtcaatagagctaaagagattttctttgacacttctctgatt
gatgattctgaggtttctactagggaatctaatttgagatggtggaagaggcaatcgact
acagcgaaagctcaactgaaaaaagaaacaaggctgctgcatgagttggatttgtgctac
tacaattattgcattaagggtgatgagaaaccaaagatggacagatctccgcaacacgag
tacggtgctttgcaaactgtggtatttcccgataagattgtcaatgcgctttttggtcct
gctatgaaggagatcaatgaacggatacgtttggctttgaaaccacatgttgtgtataac
tccagaatgaatgctgaagagttaaatcgtacggtggagtttttggatccagaagaagat
ttcaatgcttttgaaattgatttttcgaaattcgacaagtcaaaaacttcactgcatatt
agggctgtgattgagctttacaagttatttggtttgaacgacttgttcgcccttttgtgg
gaaaaatcgcaatgccagacgaaaatcagagactttgtcaatggcataacggcttatttg
ttgtatcagcagaaatcaggcaattgtgacacttatggttctaacacctggtctgctgct
ttggctttgctggaatccatgcctttggagaaggctaaattcatgatttttggtggtgat
gattcactgatacttttcccgaaacatttgacaattgaagatccatgtagacgtctggcg
tctttgtggaatttcgactgcaaacttttcgatttcaaacataatatgttttgtggaaag
tttctgctgaaagtgggtgatagattcaagttcgcacctgatcctatgaagttgattacg
aaattaggtcgcaaggacattgttgacggacgattgttgtcggaaatctttgtttccgtt
ggtgacaactaccgttcttatcgcgactatcgtattttggagcagttgacttatgctctt
cgtgagaggtacaggaccactgaagatccgactgctgcattggtggctttgaagaagtat
atcttcgattttaagctatgggctagtatgtttaattataagggtgagtttgttgagtgt
agggtggataggaactttgaatggtaa
DBGET
integrated database retrieval system
