Viruses: 991073
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Entry
991073 CDS
T40000
Symbol
LIYVs1gp1
Name
(RefSeq) Lettuce infectious yellows virus; polyprotein
Virus
31713
Lettuce infectious yellows virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
Vmethyltransf
Viral_helicase1
AAA_19
Chropara_Vmeth
Flavi_DEAD
CDKN3
Motif
Other DBs
NCBI-GeneID:
991073
NCBI-ProteinID:
NP_619692
RS:
NC_003617
UniProt:
Q83044
LinkDB
All DBs
Position
NC_003617:join(98..5692,5694..7238)
Genome browser
AA seq
2379 aa
AA seq
DB search
MALEVESAFSLSYLLKENKQTSNNLFSLIQVPYTKMTHAKGKKTHLLRCILGSPFETLTK
SSIRRSLKNLREVCNLPYCNFKKIPKNISYKYQNPFLKLYEINNNFINCKVGATGNTNST
YDWRNLSTIGNGWSVTSYHNDSVSRLHVSMVNNIPNSNTKKLSWWVTRVRSKNPWKRPYK
VIYQRDFRDDGIKPYVSEFILYAPKNRADLEMQSILLSSVECFQDIKYALNYWTNLKFKE
ICNSALKRFTQTNIIITPVKPRVVSVNKAREVSSSVEVKLQRYEREGEVFVVSKAGKEDT
RVLNDDNAIRNLFNATLNGGKYKLHPEAKSATGKRFKYYKDGFCWLDVFADANRRIPEWV
KPHCLLTGSVLMSCGLWDFAKRKMVSVSHGLLHYDRKLERSSARAGVRDFVGASNEAVQR
EDFRDLDLRVEEFAERVLETANLRSDNRLIDNILTRASDYINKKSKESKELDINVCLSMD
EKKMITNLFPDIQMSFNQKSYSNHGVFNAMRACENFYFSRKFKNSDYIDAGGDVVSTLRS
KNHNVHICSPRLDLKDAARHIQRATVIDGLKGYGETISFCTNKTEDCAVNRDIIIAVEVY
DMTLRDMAKAMLSHGSRKFEFSCIIPPEIFTKECNVELYEGRLKVTRIGDNVEYYYGSNG
ETFSHSCQTLKDILSVQVFQFGGRVFKKTLEHSRGQLHFFSICICEKIEPGSVKLKTYYQ
RSELDKVTLRIPVKDSFGVVTHYIIKEDREFVSSMIEYVANTGIKIDDKMVEWTYSQYRA
KKTVTIKSGKVTQKETRIRKELIPGFIAIIMSEGIRAREKTHYLAKMLYTSHYKPSIVNI
IFRLIMHFLGGTKRFIYESLVDCLKFLTNSDYIDTIVNTESRIEDLDKWFVFEQNVTITT
DAEDQPSILEQSVKTFLSKYSEDVYERGDRSEFELEEFSSEQDLVDQLLNSGGGSKEDEW
FYSYIFSIVRTKCTLSLAWRWTNRIFNFITSCRAKGKDFVKYIYEIIKIIINKPWEALCH
YLVQGYKTVLKIPMTCVDSVNYLKRKSLEKILSYFSHERADDEYIFPGYDSDFSEESGDY
GDENTELDSRSRCTVIKSKVEMLFRNIKGHIEKFLQRCGIIDQYNKIYHWFKSILTDVDC
FNSVLNFITHTGCDALLAVLTGHFSIASCALKFMTDVVIEKNLSEKHHTTTKLIAGNLTQ
CIYKLDFIHPIWIPIRWGVKEISKIHIKKKLLNWRSTKEVTNESICKDLVHKSYIKYFDI
KKAVWLLWFSLLIIFLHPTLGFFILFSIYPAIEIKRYYNNVVCFNNIKMSYPHVIDRLGG
TYNFAKLKKAVREKFSENKSQGVKISEIPAEKDEDVMPPLEEVETPKRSVGRPSSKQDDI
EDECNIKEDPTESLNFSNIEATSNRYDTLRVGNSKLCKFLRFYPKSKCYANIQTGDLIRD
SIEEFYHLERSKLDIEISKMQRVVEIMNDTGRMLDNVRRMIDDRSMYVTLDGVSWYRLGC
KDKNPAKEDFKAIFDHNFNIMEGNAKVKEFAVSSDEWRGMYSNERCRAIEQLFNDNNEMV
RRPDVNGLKFYNKPPGAGKTTTIAKLMSKDLKNKVKCLALSYTKVGRLELIDKLKKDGIE
KPEKYVKTYDSFLMNNDNILEIVNLYCDEVFMMHAGHFLTLLTKIAYQNGYCYGDVNQIP
FINRDPYTPAYLSREFFRKQDLNYDTYTYRCPLDTCYLLSNLKDEMGNIIYAGGVKNVNE
VYPTIRSLNLFGINVVGEVPVEYNAKYLTFTQDEKLNLQRHIDSQGGCRNAVSTVNEAQG
CTFSEVNLVRLVQFDNPVMSDINQFVVAISRHTTTFKYFTPHSRLNDRVSNAISSLQSVS
DFVLKTIILDSAFDVYTLNLTHRDFKLPLCRPPAARYESIIDLMDIISPGVAFYNYLHRT
LIFEYSDYYLPPCEDLRITLSKSKPYHPGAYVVSKILGKGERNRPNTWKQVIQSLSHRNF
NAPIINHKLDVKRSAQILYDSVVKSLRQDRLTEWYEPILPDLFKIGKWLDDRDGSKYRML
NRRLDFASLADKFKTLNLMVKGETKPKMDLSTYDSYNAPANIVYYQQIVNLYFSPIFLEC
FARLTYCLSDKIVLYSGMNTDVLAELIESKLPLGLNAYHTLEIDFSKFDKSQGTCFKLYE
EMMYKMFGFSPELYDRDFKYTEYFCRAKATCGVDLELGTQRRTGSPNTWLSNTLVTLGMM
LSSYDIDDIDLLLVSGDDSLIFSRKHLPNKTQEINKNFGMEAKYIEKSSPYFCSKFIVEL
NGKLKVIPDPIRFFEKLSIPIRQEDFVNGSVVKERFISFKDLMKEYDNDVAVIRIDEAVC
YRYSIPVGCSYAALCYIHCCMSNFVSFRRIYDNCEIVWI
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgaagttgaaagcgctttttctttatcttatttgctaaaagaaaacaaacaa
acctcaaataatctcttttcgctgatacaagtaccctacacgaaaatgacccatgcgaaa
ggaaagaagacacatcttcttagatgtattttaggatctccgtttgagactttaaccaag
tctagcatccgtaggtccctgaaaaacctaagagaagtctgtaatttaccttattgcaat
tttaagaaaataccaaaaaatataagttataagtatcaaaaccctttccttaaattatat
gaaataaacaataattttattaattgtaaagtgggcgccactggtaacacgaattcaacg
tacgattggcgtaatttgtccactattggtaatggttggagtgtgacgtcatatcataat
gattctgtcagtaggttacatgtaagtatggtaaataacattcctaattccaacacgaag
aagctcagttggtgggttactcgagttaggagtaaaaatccttggaaacgtccctacaag
gttatttaccaaagggattttcgagatgacgggattaaaccctatgtcagtgaatttatt
ttatatgcccctaaaaatagagctgacttggaaatgcaatccatactactgtcttcagta
gaatgtttccaggacattaagtatgccctcaattactggaccaatttaaaatttaaagag
atctgcaatagtgcgcttaaaaggttcactcaaaccaatatcattatcacccctgtaaaa
cccagggttgtgagtgtaaacaaagcgcgagaggtttcgagtagtgtagaagtgaagttg
cagagatatgagcgagagggtgaagtattcgttgtgtccaaggcaggtaaagaagatacg
cgagtcttgaatgacgacaacgccattaggaatctgttcaacgccactctcaatggtggt
aaatacaagcttcatccagaagcaaaatctgcaactggaaaaagattcaagtattataaa
gacggattttgttggctcgacgtctttgctgatgccaacagaagaataccagagtgggta
aaaccacattgtcttctcacgggatcagttttgatgtcgtgtggcttgtgggattttgca
aaaagaaagatggttagtgtgtcgcacggattgcttcattatgataggaagttagaaaga
tcttcagctagagcgggggtgagggactttgttggtgcctcaaatgaagccgtgcagagg
gaagacttcagagatttagatctacgggttgaagagttcgccgagagagtgctagagacg
gccaatttgagatctgataacagattgatagacaatatattgaccagggcatcagattac
attaataaaaagagtaaagagtctaaggagttagatattaacgtttgtctgtccatggat
gagaagaagatgatcaccaatttatttccggacattcaaatgagttttaaccaaaaatct
tactcaaaccatggtgtcttcaatgcaatgagggcttgcgaaaatttttacttctcaagg
aagtttaaaaattcagactatatagacgcaggtggtgatgtggtatccactttacgttct
aaaaaccacaatgtccacatctgttcgcccaggttagatttgaaagatgctgctagacac
atccaaagggccacagttattgacgggctgaaaggatatggtgaaaccatatcattctgc
accaacaaaacggaagactgcgcggtgaacagagatataatcattgcagttgaggtttat
gacatgactttaagggacatggcaaaagctatgttgtctcatggaagtaggaaatttgag
tttagttgtatcataccacctgagatattcactaaggagtgtaatgtcgaattgtatgaa
ggcagactcaaagtgacgaggattggagataatgtagaatattattacgggagcaacgga
gagacgttcagtcatagttgtcagactctaaaagacattctatcagttcaagtcttccaa
ttcggcggccgtgtgtttaagaaaaccttggagcactctagaggacaattacacttcttc
tccatatgcatttgcgaaaaaattgaacctgggagtgtaaaattgaaaacgtattaccag
agaagtgaattagataaagtcaccctgagaataccagttaaagacagctttggggtggta
acacattatatcataaaagaagatagagaatttgtcagttctatgatagagtatgttgcg
aatacaggcataaaaatagatgataaaatggtggaatggacctattctcagtatagggct
aagaaaactgtgactataaaatccggaaaggtaactcaaaaagagaccaggattagaaaa
gaactaattccagggtttatagccataatcatgtcagaggggatcagggcaagagaaaag
actcattatcttgctaaaatgttgtacaccagtcattataaaccttcgatagttaatatc
atctttaggttgataatgcattttttaggtggcactaaacgatttatatacgagtcgttg
gtagactgtttaaaatttttgacaaacagtgactacatcgatacaatagtcaacaccgag
agtcgtatagaagacttagataagtggtttgtatttgaacaaaacgtcacgataaccacg
gacgcagaagatcaaccttctatattagaacaaagtgtgaaaacattcttgagcaagtat
agtgaagatgtatatgaaaggggtgatcgtagtgagttcgaattagaagaattttcaagc
gaacaagatctggttgatcagttgttgaactctggaggtgggtctaaggaagacgaatgg
ttctattcatatattttttcaatagtcagaaccaagtgcactctgagtttagcctggaga
tggacaaatagaatattcaatttcataacatcttgtagagctaaggggaaagattttgta
aaatatatttatgagatcataaaaattataatcaacaaaccctgggaagcgttatgtcac
tatttagtccagggatataaaactgtattaaaaatacccatgacttgtgtcgatagtgta
aattatttgaagaggaagagtctagagaaaatactgtcgtatttttctcatgagagagct
gatgatgagtacattttccccggatatgatagtgattttagtgaagagtccggtgattat
ggagatgaaaatactgaattagacagtcgcagtcgttgtacagtcattaaatcaaaagta
gaaatgttgtttagaaatatcaaaggtcacatcgaaaaattccttcaaagatgtgggata
atagatcaatacaataagatctatcattggttcaaatctattttaacagacgtagattgt
tttaattcagtattaaattttataacacacactggctgtgatgcattattagcagtcctc
acaggtcatttctcaatagctagttgtgcgttaaaatttatgaccgatgtggtgattgaa
aagaatctcagtgaaaaacaccacaccacaactaaattaatagcaggcaatttgacgcaa
tgcatatacaaattggatttcattcatccaatttggatccctattagatggggcgtcaaa
gaaatatcaaaaattcacatcaaaaagaaacttctaaattggcgatcaaccaaagaagtc
accaacgagagtatttgtaaagatttagtgcataagtcttacatcaaatactttgatata
aagaaagcagtttggttgttatggtttagtcttctaatcatatttttgcatccaacgttg
ggtttctttatattgtttagcatttatcctgcgattgagataaagaggtactacaacaac
gtagtctgctttaacaacattaaaatgagttatccacatgttattgacagattaggaggt
acctacaatttcgccaaattaaagaaagccgttagggagaaattttctgagaacaagtct
caaggggtaaaaatttcagaaataccagcagagaaggatgaagatgtcatgccaccacta
gaagaagtagaaacacctaagagatcagtaggaagaccttcttcgaagcaagatgatatt
gaagatgaatgtaatattaaagaagaccctactgagagtttaaatttttcaaacattgaa
gccacatcaaacaggtatgacactcttcgtgtagggaacagcaaattgtgcaaattccta
agattttaccccaagtctaaatgttatgctaacatacagactggagatttgattagggat
agcatagaggaattttaccatttagaaagaagtaaactggatattgagatcagtaaaatg
caaagggtagtagagatcatgaatgatactggtcgtatgttggataatgtcagacgtatg
atcgacgacagatccatgtacgttaccttagatggagtaagctggtataggttaggatgt
aaagataagaatcccgccaaagaggactttaaagccattttcgaccacaatttcaacatc
atggaagggaatgcgaaggttaaagaatttgctgtatcatctgatgaatggaggggtatg
tacagcaatgaaagatgtagagctatagaacaactcttcaatgataataatgaaatggta
agaagacccgatgtgaatggtctaaaattttataataaaccaccaggggcagggaagacg
actacaatagccaaattaatgagcaaagatttaaaaaataaggtcaaatgtctggctcta
tcctacaccaaagttgggcgtttagagttgatagataaattgaagaaagatggaatcgaa
aagcctgagaagtacgttaagacatacgacagtttcttgatgaacaacgacaatatctta
gaaattgtcaatttatactgcgatgaggtcttcatgatgcatgcgggtcacttcttaact
ctattaaccaagatagcataccaaaatgggtattgttatggagatgtcaatcaaattccc
ttcattaatagggacccatacacacctgcttacttatcaagagaattctttaggaaacaa
gatctaaactatgacacttatacgtacaggtgcccattagatacctgttacttgttgtcg
aatttaaaagatgagatgggtaacatcatttacgctggtggagtcaaaaatgtgaatgag
gtttatccaaccatcaggtcactaaatttgttcggtatcaatgttgtgggtgaagtccca
gtcgaatataatgccaaatatttaacttttacacaagatgagaagttgaacctacagagg
catatagattcgcaaggaggttgcagaaacgcggtcagcactgtaaatgaagcgcaggga
tgcactttcagtgaagtaaacctggtcaggttggttcaatttgataaccctgttatgagc
gacataaatcaatttgtcgtagcaatttccaggcatacaacaacattcaaatacttcaca
cctcactctcgattaaatgatagagtgtccaacgccatatcatcactacaatctgttagt
gattttgttttgaaaactatcattttagacagtgcctttgacgtgtatacgctgaactta
acgcacagggactttaagttaccactgtgtcgaccaccagctgcgagatatgagagcata
atagacctgatggacataatatcaccaggggtggccttttacaattatttacacaggacg
ttgatttttgaatactcagattactacttacctccatgtgaagatttgagaataactttg
agcaagtccaaaccataccaccctggagcttatgttgtctcgaaaattctcgggaaggga
gaaagaaacagaccgaacacttggaaacaagttattcagtcactatctcacaggaatttt
aatgcgccaattatcaatcacaagttagatgttaaaagaagcgcacaaatactatatgac
tcggtggtgaaatcgttaagacaagacaggttgactgagtggtatgaacctattttacct
gaccttttcaaaatcggtaagtggttggatgatagagatggtagcaaatatcgtatgttg
aaccgtagactagactttgccagtttagcagacaagttcaaaactctcaacctcatggtt
aagggtgagaccaagcccaagatggatcttagcacatacgacagttacaatgctccagct
aatatagtctattaccagcagatagtcaatttgtatttttcacccatctttttagagtgt
ttcgcaaggttgacttactgtttaagtgataaaatcgttctatacagcggcatgaacaca
gacgttctagctgagttaattgaaagcaaactaccattaggtcttaacgcatatcacacg
cttgagatagatttcagcaaatttgataagtctcaaggcacatgcttcaaattatatgaa
gaaatgatgtataagatgtttggattttctcctgagttgtacgatcgagacttcaaatac
acggagtacttctgtagagcgaaagcaacttgtggagtggatctcgagttaggaacacag
cgcagaactggatctccaaacacttggttgtctaacactctagttactttaggtatgatg
ttatcatcttacgacattgatgatatagacctactccttgttagcggggatgacagttta
attttttccaggaaacatctaccgaataaaacccaagagataaacaaaaactttgggatg
gaggccaagtatatagagaaatcatctccatacttctgctccaaattcatagttgagtta
aatggtaagttgaaagtcatacctgatccaatacgattctttgaaaaattgtcaattcca
attagacaagaagatttcgtaaacggaagcgtagtcaaagaacggttcatatcattcaaa
gatttgatgaaagaatatgataatgatgtcgccgttatacgcattgacgaagcagtgtgt
tatagatacagcataccggttggctgttcctacgcagcattgtgctatatacactgttgc
atgtcgaattttgtttctttccgtaggatttatgacaattgtgaaattgtgtggatttaa
DBGET
integrated database retrieval system
