Viruses: 991092
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Entry
991092 CDS
T40000
Symbol
PepRSVs1gp1
Name
(RefSeq) Pepper ringspot virus; 195K protein
Virus
31750
Pepper ringspot virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
Vmethyltransf
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
991092
NCBI-ProteinID:
NP_620033
RS:
NC_003669
UniProt:
Q84918
LinkDB
All DBs
Position
NC_003669:200..5296
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AA seq
1698 aa
AA seq
DB search
MASRGFKLNQLIDIDEFSAEQRGQFFDMMLSKPDSQLGAVMQRNLVDKIDDMMRERKGRE
CVVLHELLSQKDQNRSIELYPEFNIVSKDDKNMVHGFAAAERKLQALLLLARVPKLEEVD
DIGGQWSYWLTRGEKRVHSSCPILDVRDKQREMQRQSFLKSFRDNATTSDSVVTDAQYEM
YNAFKNGVDKPNFVRCNNTFQDCNCRGYTKDGLRRGAEHAIALHSLYDFELDSVADAMIE
KKTKFLHAAMLFAPEAIMIEEGPLPDVNGYYHRVQKNLGTRPERIMFGFHDDPSYNYIHT
WSEYKKYLLGKSFVRRGHTFFFEPWQGRGDTMFFTLYRMTNVPRTGLFGEEYYRRLYIKR
WAGMVIAPVFDIDEVTMKIKRKQLYVEKAFLDKCLDYVARLSDQQLTINNVKSFMSSNNW
VLFINGAAIKNKQSMSPGDLQLLAQTILVKEKLSRPLMTEMRTRMAEQAAPVSGFCDLIV
TTWRQKVWNGNLKRRVVRDLAKLFKLERGSETLETEDPIRYYEIWDYLTLFFSEEEEAVR
SLPDINDAKNKSDKIRNEAKDAANNVIKTKYENFQSPIDELKTPLIRKSENIKGAKKDRS
VCNLFVGWQRLFHPEGSFKVLTDKTEEVKSVAVTKPFVVEEAPKLISDDEAFLELDRLVD
SCEGSDEDCVIDEFLAGLSVCNSFSSEASSSGTKSDGGEIAVGIIRPKSPPGFLRPLVRS
EQVEKTVERADPEVSSIVAESRFPEKPLETGDFSIDARLEYIYYLKCLVRAQNNEILMML
RSYQKGIIRAGGRGYPNGLDVWDLKFKKWVIEPPILNHSKVFVPDLKSFENGILCGEIID
ASWDKSALDIVANRAFEADYCFVCDQLFLCNERVILKNLLKLEVLPLDCKFKLVDGVPGC
GKSTAIVESANPLFEVILSMGKEATEDLIARFSKKKFGINIKKRVRTVDAFLMHCSNGEC
IGETLHFDEALMAHAGMVFFCAQLAKAKLVVCQGDQKQIAYKPRVAQVNLKFLSLVGRFD
EVEEKRLTYRCPIDVALSLDRFYTGKVVTKNNVLRSMTTKRISSKEQVTMEKGVQYLTFL
QSEKKEIATMLALRKIEAAVNTVHEAQGKTFKKVILVRTKVTDDVLARGQEYRIVAISRH
TQAMVYETVKDDEVSRLIAETSSLPKASLMRYFVTDAALWRCRSRFDSFSHHDGPCSVPD
TGTTVDIQTWYDDIFPGNSVRDSSLDGYMVSTTDCNVRVDNVVLKSGNWKDKYGDEMKCL
VPVLRTAMPDKRKTTQLEGLLALQKRNCAAPELQENVHESVLVDETIKRLKDVVYDVEKI
RSDPINQKIHMQKWWKNQSTSVQAKIISDVRELHEIDYSSYMFMIKSDVKPKMDTTPQSE
YAALQTVVYHEKLINSLFGPIFKEINERRLDAMHPHFVFNTRMTSSDLNERVKFLHPDTD
YDFIEIDLSKFDKSANQFHLHLQLEIYRMFGLDEWAAYIWEVAHTQTTVRDIQNGMMAFI
WYQQKSGDADTYNANSDRTLCALLSEMPLEKAVLMTYGGDDSLIAFPKGTTICDPCDKLA
TKWNFECKIFKFNIPMFCGKFLVKVQDRYEFVPDPVKVVTKLGKKSVIDTQHLAEIFISL
NDSNRALSDANVLYALDVAIADRYKYEKSSVFALCALWKHIKSFSALCVLYREGEKELDY
KKVDWKKATAAVKQFYDW
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgagaggttttaaattaaatcaactcatcgacatcgatgaattcagtgcggaa
cagcgaggtcaattttttgacatgatgctgtctaaaccggattctcaactgggggctgtt
atgcagcgcaacttagttgacaagatagatgatatgatgagagaaagaaaaggacgagag
tgtgtggttctccacgaacttttgtcacaaaaagatcagaatagatcgatcgaattgtac
cctgagtttaacattgtctccaaagatgataagaacatggttcatgggttcgctgctgct
gagagaaaacttcaagcgttattacttttggcgagagttccgaagcttgaggaagttgat
gacatcggtggtcaatggtcgtattggttgacaagaggcgaaaaaagagtgcattcgtca
tgtcctatcttggacgttcgtgataaacaaagagaaatgcagaggcagagctttttgaag
agtttcagggataacgcaacgacttccgactcggtcgtcactgatgcgcagtatgagatg
tataatgcattcaagaatggtgtggataaacctaattttgttaggtgtaacaacactttc
caagattgcaattgcaggggttatactaaagatggattgcggcgcggtgcagaacatgca
atcgctctccatagtttgtatgacttcgagctcgacagcgtggcagacgctatgatcgaa
aagaagacgaaattcctgcacgcagctatgcttttcgcacctgaggcaattatgatagag
gaaggtccactacctgatgttaatggttactaccacagagtgcaaaagaatcttggaact
aggcccgagagaattatgtttggttttcacgacgacccttcctataattatattcacacc
tggtctgagtataaaaaatacttattaggaaaatcttttgttcgacgtggccatactttc
ttctttgagccgtggcagggtagaggagatacgatgttctttacattgtataggatgact
aatgttcccagaactggcttgtttggagaagagtattacaggaggttgtacattaaaagg
tgggctggaatggtgattgcgccggtcttcgacatcgacgaagttactatgaagatcaag
aggaaacaactctatgttgagaaagcgttcttagacaaatgtttggattacgttgctagg
ttatctgatcaacagctgaccatcaacaacgtaaaatcattcatgagctctaacaactgg
gtcctgttcattaacggggcagctatcaaaaacaaacagtccatgtctcctggagacttg
caactgttggcacagacgattctagtgaaagagaaactgagtcgtccattgatgacggag
atgaggacaagaatggcagagcaagcagctcctgttagcggattctgcgacttgattgtt
acgacttggcgccagaaggtgtggaatggcaatcttaaaagaagagtggttagggatttg
gcaaaactgtttaaactagaacgtggttctgagaccttagagacagaagacccaattcgt
tactacgaaatctgggactatctgactctattcttctctgaggaagaagaagctgttcga
agtttaccagatatcaatgatgctaaaaacaaatctgacaagattcgcaatgaagctaaa
gacgcagcgaacaatgttattaaaacgaagtatgagaatttccaaagcccaattgatgaa
cttaagactcctctgatccgaaagtctgagaatatcaaaggtgcaaagaaagacagaagc
gtttgtaacttgttcgttggttggcagcggttgtttcatcccgaaggcagtttcaaagtt
ttaactgataagacagaagaagttaagagcgttgctgtgaccaaaccgttcgttgttgag
gaggctccgaaattgattagtgacgatgaagcatttcttgaactggatagacttgtggat
agttgcgaaggttctgacgaagactgtgtaattgatgagtttcttgctggtttgagcgtc
tgtaatagtttttcttcggaggcttcttcgagtggaactaagtcggacggtggcgaaatc
gctgttggaattatacgtccaaagagtccacctggtttcttgagacccttagttcgaagt
gagcaggtagaaaagacagttgaaagagcagatcccgaggtgagttcgatagttgctgaa
tctcggtttcctgaaaaacccctggaaacaggagatttttcgatcgatgccagacttgag
tatatctattatctgaagtgtctagtgcgtgcgcagaacaatgaaattctgatgatgttg
aggtcgtaccagaagggtataattcgtgctgggggaagaggttatccgaatggtttagat
gtttgggatcttaagtttaagaaatgggtgattgaacctccaattctcaaccactcaaag
gtttttgttccagatttgaagagtttcgaaaacggaattttgtgtggggaaatcattgat
gctagttgggacaagtccgcgttggatattgtcgctaacagggcttttgaggctgattac
tgttttgtgtgcgatcaactctttttatgcaatgaaagagtcattctcaagaacctgctt
aagctggaggttcttcctttagattgcaaatttaagttggtcgacggtgttcctgggtgt
ggaaaatctactgcgattgtagaatcagcaaaccccctctttgaagtgatcttgtcaatg
gggaaagaagcgacggaggacttaattgctaggttctcaaagaagaaatttggaatcaat
atcaagaagagagttcgaactgtcgacgctttcttaatgcactgttcaaatggagaatgt
attggagaaactctccacttcgacgaggccttaatggcccacgccggaatggtgtttttc
tgtgctcagctagcaaaggcgaaacttgtcgtatgtcaaggagatcagaagcaaatcgct
tacaaaccaagggtggctcaggtgaatctaaaatttttgagtctcgttggtaggtttgac
gaggttgaagagaaacgcctgacttacaggtgcccaattgatgtcgctttgtccttagat
agattctatacaggaaaggttgttactaagaacaacgttcttaggtcaatgactacaaag
aggatcagctcgaaggaacaagttacaatggaaaagggggttcaatatttgacattctta
cagagtgagaagaaagagattgctaccatgttggcgctgaggaagattgaagcagctgtg
aacacggttcatgaagctcaaggaaaaactttcaaaaaggtgatacttgtgcggacgaaa
gtgacagatgatgtgctggcgagaggacaggagtacagaatcgtggcaatttcaagacac
actcaagcaatggtatatgaaacagtgaaagatgatgaggtgtctagactgattgctgag
acttcttcactcccaaaagcatctttgatgagatactttgtgactgatgctgccttatga
cggtgtcggtcgagattcgattccttttcacaccatgatggcccgtgttcggttccagac
actggaactactgtcgatatacaaacatggtatgatgatatttttccgggaaattctgtg
agggattcgagtctcgacgggtacatggtcagtaccactgactgtaacgttcgagtcgat
aatgtggttttgaagtcaggtaattggaaagataagtacggtgatgagatgaaatgtcta
gttccagtccttcggactgcgatgccggataagcgaaagaccacgcagttggaaggtctg
ttggctttacagaagcgaaactgtgcggctcctgagttacaagagaacgttcacgaatca
gttctggtggatgagactataaagagattgaaagacgtcgtgtatgatgtggagaaaata
aggtcggaccccattaatcaaaagattcacatgcagaagtggtggaaaaatcagagcaca
agtgtacaagcgaagatcatcagcgatgtgagagaacttcatgagattgattactcgtct
tatatgttcatgatcaagtcggatgtgaaaccaaagatggacacgactcctcagagtgag
tacgcggctttgcagacagtggtgtatcatgagaaactgattaattcgttgtttggcccg
atattcaaagagatcaatgagaggaggttggatgcaatgcacccacacttcgtcttcaac
acaagaatgacatctagcgatttgaatgaaagagttaaatttctgcacccagacacagac
tatgatttcatagagatagatctgtcgaagtttgacaaatccgcgaatcagtttcaccta
catctgcaactggagatttaccgcatgtttgggttggatgagtgggccgcctacatttgg
gaagtggctcacactcaaacgactgtcagagatatccagaatgggatgatggcctttatt
tggtaccaacagaaaagtggagatgctgatacatacaatgccaattctgacagaacactt
tgtgctttattgtcggagatgcctttggagaaggctgtgttaatgacatacggaggagat
gactcgttaattgcttttccaaagggaacaacaatttgtgacccatgtgataagcttgcg
acgaaatggaattttgaatgcaagatttttaagtttaacattccgatgttctgtgggaaa
tttcttgtgaaagtgcaggataggtacgagttcgttcctgatcctgtcaaagttgtgact
aaacttgggaagaaatcggtgatcgatactcaacacttggctgagatattcatatccttg
aatgattccaaccgagcgttgtctgatgcgaacgttttgtacgctctggacgtggcgatc
gccgatagatacaagtatgaaaagagttctgtttttgccttatgtgccttgtggaaacac
ataaagagtttctcggctctatgtgtgttatacagagaaggtgaaaaggagttggattac
aagaaagtcgattggaagaaggcgactgccgctgtgaaacaattctatgattggtag
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