Viruses: 993327 Help Entry 993327            CDS       T40000                                  Symbol SDVsRNA1gp1 Name (RefSeq) Satsuma dwarf virus; polyprotein Virus 47416  Satsuma dwarf virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  RdRP_1 RNA_helicase RdRP_4 AAA_16 Motif Other DBs NCBI-GeneID:  993327 NCBI-ProteinID:  NP_620566 RS:  NC_003785 UniProt:  Q9WAL8 LinkDB All DBs Position NC_003785:301..6546 Genome browser AA seq 2081 aa AA seqDB search MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDGSVRIRELPVGLVLKGVMAQY RSILWTQFVADPATTTVDRKSFDFWLFCRRAEAAQERAFRARQSKRAAKAAALDAEGLID RSYKGRTYKVSTRGLSWKSVRAAQKAARNAAKNFGFAISANPFSALSALPSEGKGLSAGE TPATVAEVAPQCFWAALRSLKREFSETPVEDLPFLGLVLPALPQRNGELARTLRAQLRAH QAARVVASGVSLREIPRRTTTTVKVVVPRVTIPVVTFNGAVLHHPKHPVIVALLKRVTIR AKPICERRTYVRLVDGPGLFPSPRTPTLDLGFMEKVSELATMPGDSIEKCIAIKCILSND YNFKEDADMGDVLLSLQSKYTGGGDTAEHRGFISGALYGAGVCVVTSAWKFLDATLHASQ IGTQISQILDYIQSGLAWLSSSYASIANFFTKGKVYIMECLELVKAKLPSYLFSAEVGRY ILLLLGVFLCLGLVNSLIYSVAPQYSLSFGTVCKISLGALALVGLGDLVAYLFNSPGAKL RAFVNIVCNMCGCKNFFAPSSDGEERSGFSVLSMMGAICALQSLLPANVSRFSWDCGKWA QTFKTGFDCHEKFATVCESLSVWLLSKVGLFKSSESQAMQTILLSSGINTCGWLEKVAAF HSDVHSSQICIPDLLLRARQLIETGDTISDLLSNSTVSLSFLLRERIKLALRELKEDHTQ LQLAVDVSVSSECPFVLFFAGDSGVGKSTAMKKFREEVLDKLGYPKTARFYPRNPGEKFW SGYLRHTAVIYDDFAQIPQGDMTYDEAELIRIVTNAVVTVPMAIAEEKGRTFRSKFVFAC TNRYCESEDAPLADEMAFRRRRHLYIHVARKPGVEPGPRGVDNLEFSEMDNRDSNGEPAY QLNDQGKRVLINQKLTYDQLLQLYFERYQAFKVLEGQLEGSVARAPSSSNYEGCDNWWTL VGSEAKFEAVYFNGEPVSEDDQLTQLGNYKTRYDILRARVILESIDYADCDFIIKNFSAM GEGIYHADPEVNATGQRHFSAMSPVTRRLICSCLKTRREDEIKSHSLLSKFKSLLTVPVD AWKAAPAWFKCISLLLVAGGVGYALCRAISGIIGIFRKGPAAASLALFSGGIGAVLRGDS PDDPREERDNPDVIVTKGRGKAIWAGAEIPEALEALRKSQVVLMGTGRKGEPVMCSALPI TSHSVLCTTHEIEAFDPNQNMSLIVNNSIYSFVLIPGAIMYKRYDQPNLVDKVHELVRVD LPKNKGFSLNARAQFSEDFYDNGTAMKCWVVPNKNPAVADIMRKVDCEKSSQIIDIFASE LSRSSGCEPVRQTQRFIYADGPALNGHCGRLLCANLAGHWRVIGMCAGEGKNRAGVTKAL YADIPHEFLRADNLNAVQRGAELDAAILDRFSIPISECRKELTPMTTRLGYVVGQYPRAL RKTSIVPSIIHDNLWRKPETEPTILGKIDDRSPFPYDPYATIGEKFVQEVGPIDLSVGSD ASLVVANIGSSWKAVGKPQCPTVLTWEVAINGDAAIPYCERLPLSTSEGYPDSIQRNFGE KGKKRFFDLKGENVRVPTPALMEELEVLERELQKEEVCLTCINTACAKDEKTAPKKVRVQ PKTRIFEILPFQINIIIRRYLMFWMQLLMVAHDELPSKVGINVYSESWDRLLGRHTRLAN HFTGDYSGFDTSTPRVLVYAIIDKINELADDGEVNQRTRRNIIRFVLNRYLISDGVLYEI HGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGDDNFV SVATPVASVYNLTTISNFLGRIGVKLGDGAKTGTIKPFIPLEEVDFLKRQFVADSGSTAI LCPLKKISIEERLFYVRGGQDEIAALELNIATALCEAFFHGKEYFSFLEGKIIEAMRKSG VALSRPLPTMESVRAWYMSQRGNTKIRSPSFEGLGTMSGILNIGLAEARSVGGVACFSGI EFRGRSDDHLMVIPTYIPGGWRTKQQQTYISFVRDSEKMAQVIKRVAHFSTVVATDKSMA YLVAICIAYSRGSISRMEVRCHVQNLKVAEMLLCNQICNFL NT seq 6246 nt NT seq  +upstreamnt  +downstreamnt atggagatctacggattctcccccctctccttccaggacaccgagtcctggaagaactct gctttcgcagcctgccgaggctgcaagacctaccccatcgaggaggtaggtactgacgga tccgtgaggatccgggagctcccggtggggctcgtgctgaagggcgtcatggcccaatac cggtccattttatggacccaatttgtggcggaccccgccactaccaccgtggaccggaag tcctttgacttctggctcttttgccgccgtgctgaggcggcccaggaacgagcctttagg gctcgtcagtccaagcgagccgccaaggccgctgccctcgatgctgagggcttaatcgat cgctcctacaaggggcgaacttataaggtctccacaagaggcctgtcctggaagtctgtg cgagcagcacagaaggccgcacgaaatgcggcaaaaaattttggatttgccatctcggcg aatcctttctctgctctttccgccctcccgtctgaagggaagggcctttctgcaggtgag actcctgctactgttgctgaggtggcacctcagtgcttttgggccgcactgcggtcctta aaaagggagttttctgagactcccgttgaagacctgccctttcttgggttggtcttgccc gctctgccccagcgtaatggggaacttgctcgcactttgcgggctcaattgcgcgcgcac caagctgcgcgcgtggttgcaagcggggtttccctgagggaaatcccccgccgcactacg accaccgtaaaggtggttgttccacgcgtgaccattcctgtggtcacctttaatggtgcg gtgttgcatcatcctaaacacccggtgatagttgctctccttaagagagtgactatcaga gctaaacctatttgcgagcgccgaacttatgtgcgcctggttgatggtcctggccttttc ccctctccacgaacccccactctagatctagggttcatggagaaggtctctgagttagct accatgcctggcgacagcattgaaaagtgtatcgcaattaaatgcatcctctctaatgat tacaattttaaggaggatgctgatatgggtgatgttctactttccctacaatccaaatac actggtggtggagacactgcggaacaccgtggatttatatccggtgcactctacggtgct ggagtttgcgttgttacttccgcttggaagtttctggatgcgacgctccatgccagccaa ataggcactcagatttctcaaattcttgattatatacaatctgggttagcctggctctcc agtagttacgcttctattgccaacttctttacgaaaggcaaggtttatattatggagtgt ttagaacttgttaaagccaaattgccttcgtatcttttctccgcagaagttggtaggtac atattgctacttttaggagtttttctttgtttgggattagttaatagtcttatttacagt gtggcgcctcaatatagtctctcttttgggacggtatgtaagatatctcttggcgctttg gcactagttggtttgggcgacttagtcgcctatttgtttaatagtccgggagcgaaactc cgcgcatttgtaaatattgtgtgcaatatgtgcggttgtaaaaatttctttgctccctct agtgatggcgaagaacggtcgggcttttctgttctctcaatgatgggagccatctgtgct ctgcaatctttactaccggccaacgtgtcccgcttttcatgggactgtggaaaatgggcc cagactttcaaaactgggttcgactgccatgaaaagttcgcaactgtgtgcgaatctttg tccgtctggcttctttcgaaagttggtttattcaaatcatctgagagccaggctatgcaa accatcctactctcctccggcattaacacttgcggatggttggaaaaagttgcagctttt cactctgacgtgcattcctctcaaatttgtattccagatcttttattgagagcacgtcag cttattgaaacgggcgatactattagtgacttgttatctaattcgaccgtttcgttgagc tttctcttgcgtgagcgaattaagctagcgcttagggaattgaaggaggatcacacgcaa ttgcaattagcagttgacgtgtctgtttcttctgaatgtcctttcgtgctcttctttgca ggagactctggtgttgggaaatccactgcgatgaaaaagttcagggaggaagtccttgat aaattgggatatcccaagaccgcacgtttctaccccagaaatcctggggaaaaattctgg tccggttatttgcgtcatacggcagtgatatatgatgatttcgcgcaaataccgcagggt gacatgacatatgatgaagctgaacttatcagaattgtcaccaatgctgtagtcacagtt cctatggctatagctgaagagaaggggcgaactttcagatccaagttcgtttttgcctgc accaacaggtattgcgaaagcgaagatgccccgctcgccgacgaaatggctttcagacga cgccgacatctctatatacatgtcgcccggaagccaggagtggaaccaggccccagagga gtggacaatctcgagttcagtgaaatggacaatcgggactccaatggagagcctgcctac caacttaatgatcagggtaagcgagtattgataaatcaaaagcttacctatgatcagttg ctacagctgtatttcgagcgatatcaagcctttaaagtgcttgaaggacaattagaaggc agcgtagcacgagcaccgtcctcgagcaattatgagggatgtgataattggtggactttg gtggggtccgaggccaaattcgaggcggtgtacttcaatggcgaacctgttagcgaggac gatcaattgacccaacttgggaattataagactcgctatgacatattgcgcgcgcgcgtg atactggagtccatcgattatgcggattgtgatttcattattaaaaatttttccgcgatg ggtgaaggtatttaccatgcagatcccgaggtgaatgcaactgggcaacgacattttagc gcgatgagcccagttacgcgtagattgatctgctcgtgcctgaagacacgtagggaggat gagattaaaagccactctcttctgagtaaattcaaatccctcctaactgtgcccgttgat gcctggaaagcagcgccagcttggtttaagtgcatttcgctcctcttagttgctggtgga gtgggatatgctctttgtagagcaataagcggcatcatcggtatcttccgtaaaggccct gcagcagcatcactagctctattcagtggtggaattggagcagtgctgcggggagattcg cctgacgaccctcgtgaagaacgagataatcctgacgtaattgttacaaagggtcgtgga aaggctatatgggctggagctgaaataccagaagctttggaagccctgaggaagagccag gttgttttgatgggaactggccgcaaaggtgagccagtcatgtgttcagctcttcctata acatcacactctgtcttatgtaccacccatgagatagaagcttttgatcccaatcagaac atgagcttgattgtcaataactctatttatagttttgttctgattccgggagccataatg tacaagcgatatgatcaacctaacttggttgacaaggtgcacgaacttgtacgcgttgat ttgcccaaaaataagggcttctctttaaacgctcgtgcgcaattcagcgaggacttttat gacaatggcaccgccatgaaatgttgggtggtgcctaacaagaaccccgctgttgctgac attatgcgcaaggtggattgcgagaagagttcgcagatcatagatatatttgcaagcgag ctctctcgttctagtggctgtgaacccgtcaggcaaactcagcgttttatctatgccgac ggaccagccctaaatgggcactgtgggcgcctattgtgtgccaatctggctgggcactgg cgcgtcataggaatgtgtgcgggagaagggaagaatagagctggagtcaccaaggctctg tatgctgacatcccgcacgaatttttaagagcggataacctcaatgctgttcaaagaggt gctgagcttgatgcggctattcttgataggttttcaatacctatcagtgaatgtcgtaaa gaactcacgccaatgacgaccagattaggttatgttgtaggtcaatatccgcgggctctg cgtaaaacttcaatagttccttctatcattcacgataatttgtggaggaaaccagagact gagcccacaatattgggaaagatagatgatcgctcgcctttcccttatgatccctatgcc acaattggcgagaaatttgtgcaagaagttggcccgatagatttatccgtcggatcagat gctagtctcgttgtggcaaacatagggtcttcttggaaagctgttgggaaaccacaatgt cccactgtccttacttgggaagtggctattaatggagatgcagctattccatattgtgag cggctccccctctcgacgtccgaaggttaccctgactctattcagagaaattttggggaa aaaggaaagaaaagattttttgatcttaagggggagaatgtgcgagttcctactcccgcg ctgatggaagaactagaagttctcgagcgggaactccagaaggaggaggtttgtctcact tgcattaacactgcatgtgctaaggatgagaagacagccccgaagaaggttcgggttcaa ccgaaaacccgaatttttgagatactcccgtttcaaattaatatcattattcggagatat ctcatgttctggatgcaactattgatggttgcacacgatgagctgcccagtaaagtcgga attaatgtttattctgagagttgggatagactgctgggtagacataccagattagccaac cactttaccggtgactattctggttttgatacttcaaccccccgcgttctcgtctatgct ataatcgataaaataaatgaattagctgacgacggggaggttaaccaacgcacgagaaga aatatcatcagatttgttttgaacaggtatcttatatctgatggtgttctttatgagatt catggtggaaccccctccggcttcgctccaacagttatgataaattcggttgtcaacgaa ttttatcttaagtggagttggatcgggttattgaaggaagccgggtatgctaaccaagct accctctatgcttttcatgaagccactgagatatcgctttatggtgatgacaacttcgtc tcagtggccactccagtggcttccgtatacaatctcacgacaatctctaatttcctaggg aggattggggttaaattaggtgatggcgccaaaacgggtactataaaaccttttatcccc cttgaagaggtggattttttgaagaggcaatttgttgcagactctggatccactgcaatt ctttgtcctctgaagaaaatctctattgaggagagattgttctatgtcagaggcgggcag gatgagattgctgccctcgagcttaatatagctactgctctatgtgaggctttctttcat ggtaaggagtatttttcctttctagaggggaaaattatagaagccatgcgcaagagcggc gtagctctcagtagacctctgcccaccatggaatctgtgcgagcgtggtatatgtcccag cgaggaaatacaaagatccgctcgccttctttcgaaggcctcggtactatgtcaggtatt ttaaatattggattagccgaggctcgtagcgttggtggagttgcttgcttctccggaata gagtttcgaggtagaagtgatgatcaccttatggtgatcccgacttacattccgggaggc tggcgcactaagcaacagcagacgtatattagttttgtgcgtgatagcgagaagatggct caagtaataaagcgcgtcgcccacttctcaactgttgttgctactgataagtctatggcg tatctggttgctatttgcattgcttacagcagaggatcaatctccagaatggaggttaga tgccacgttcagaatctcaaagtggcggagatgttgttatgcaaccagatatgtaatttc ctgtag

DBGET integrated database retrieval system