Viruses: 995376
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Entry
995376 CDS
T40000
Symbol
mCP, SPCSVs2gp06
Name
(RefSeq) Sweet potato chlorotic stunt virus; minor coat protein
Virus
81931
Sweet potato chlorotic stunt virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Closter_coat
RE_MamI
Motif
Other DBs
NCBI-GeneID:
995376
NCBI-ProteinID:
NP_689405
RS:
NC_004124
UniProt:
Q8JJW0
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Position
NC_004124:5244..7298
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AA seq
684 aa
AA seq
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MDILELEVDNIISTNYPDDESEIVTRAVGCKFNQDYSLPYKDREQVDFSIPYTSALRSKP
VTLELYFHIGSGYVVYTCKPADNFNQKIYESNLGSFFSSFRNLVTPRRPRGMNAFRFGYL
REGNDCFIIVEGWRVVQISNANTIFGVSLRLSLDIGDVIFSKSDKLSANQIALDSCLECT
RPDGLLKGAKPKSVNIFSETTQESVKITPIGDIPLSVFNSVTNLNLKILRSGDDSTSIKD
ETQIDKDRTTMSNEEDKKKIFRIYYSNFLDSGFKNSLNYTILWPQISCNGVDVNHQFWIG
DREDMFEGGVHYIHTTSINTLFFVHRKGDVSEYFKINEDQSARILKTIPTELTFSIVKNP
GSKYVVYVNGEKFLSTFLPNVGTKVQIGWEIKLYKDKVKNFEKSNLKTFEIVPRETQVKS
DNELVTLRKYEFGTTDFNASGWVLEKKLGLRLKTIKHVNELFTDDKPPEKEEQVDKTDKQ
DKKTPEEKIDDTVVVDKTEDAKENLEEFALKAVVYQPLSRLEDEKIFNNMIKYYESKGLT
QRQAELLIYQMGVSFCTSVNSCANTNLHLIVSKPDGSLLKVSKSDHVMRMQMLCKKYCNV
ERTLLRNRSDKIFRLLKAKVLVLPLKHARVRGIKPEMAHMACDFMDYTTIPLSDEEVLAL
NSMQRFVLMRNKHRRSIVNVNQLF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggatatattagaactagaagtagataacattatatcgacaaattatcccgatgatgaa
tccgaaatagtgactagagctgtgggatgtaagttcaatcaagattattctctaccttac
aaagatagagaacaagtcgacttctctataccttacacttccgcgttaagaagtaaacct
gtcactttagaactatattttcatataggatccgggtatgttgtgtatacttgtaaaccc
gccgataacttcaaccaaaagatatatgagtcgaatttgggatcattcttctcatctttt
aggaatctcgtcactcccagaagaccgcgtggtatgaacgcatttagatttggatatttg
cgagagggaaacgactgctttataatagttgaaggttggagagtcgtgcagatatcaaat
gccaacactatattcggcgtttcattgaggttatcgttagacattggcgacgtaatcttc
agcaagtccgacaaactaagtgctaatcaaattgctctagattcgtgtttggaatgcact
agaccagatggtttgttgaaaggggccaaaccgaaaagtgttaatattttctctgagaca
acccaagaaagtgtgaaaataacaccaattggagacattccattaagtgttttcaattca
gtaaccaatctcaatctaaaaatactgagaagtggtgacgattctacatcgattaaagat
gagactcagatcgacaaagaccgtactacaatgagtaatgaagaagataaaaagaagatc
ttccgcatttattactcaaatttcttagacagtggttttaagaattctttaaactacact
atactttggccgcagatatcatgtaacggtgtagatgtaaatcaccaattttggatcggt
gacagagaagatatgtttgaaggaggtgtacattacatacacaccacatcgatcaatacg
ttattcttcgtacatcgtaagggagatgtttcagaatattttaaaataaacgaagatcaa
tctgccaggatactgaagactataccaactgaactcaccttcagtatagtcaaaaatcct
ggaagtaagtatgtggtgtatgtcaatggagaaaaatttttaagtacatttctgcctaat
gttggtaccaaagtccaaataggttgggaaataaagttgtacaaagataaggttaaaaat
tttgagaagtccaatttgaaaactttcgaaattgttcctagagaaacgcaagttaagtcg
gataatgagcttgtgacactaagaaaatatgagtttggaacaacagatttcaatgctagt
ggatgggtacttgaaaagaagttggggctgagattgaaaacaattaagcatgtcaacgaa
cttttcaccgatgacaaacctcctgagaaagaagaacaagtcgataagacggataagcaa
gacaagaaaacacccgaagaaaagatcgacgacaccgtagttgttgacaagacagaggat
gcgaaagaaaacttggaagagttcgcactcaaagccgttgtttatcaaccactatcaagg
ttagaagatgagaaaatcttcaacaacatgattaaatattatgaaagtaagggattaact
caaagacaagctgaattactcatctatcaaatgggagtttccttttgtacgagtgttaac
agttgtgcaaataccaatctacatttaattgtatctaaaccggatggaagtttgctcaag
gtgtctaagtccgaccacgtaatgaggatgcaaatgttgtgtaagaagtactgcaacgtt
gaaagaacgttacttagaaatagaagtgataaaatattcagacttctgaaggctaaggta
ctggttttaccactgaaacatgctagggtcagaggtataaaaccggaaatggcacatatg
gcatgtgatttcatggactacaccaccatcccattgagtgatgaggaagttcttgcatta
aattcaatgcaaagatttgtattgatgagaaataagcaccgcaggtccatagtgaatgtg
aatcaactgttttga
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