Viruses: 995384
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Entry
995384 CDS
T40000
Symbol
CWMVsRNA1gp1
Name
(RefSeq) Chinese wheat mosaic virus; replicase readthrough
Virus
83544
Chinese wheat mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
Vmethyltransf_C
Vmethyltransf
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
995384
NCBI-ProteinID:
NP_059513
RS:
NC_002359
UniProt:
Q9WJD7
LinkDB
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Position
NC_002359:102..5678
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AA seq
1858 aa
AA seq
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MPIDSSSILGIISEEDVIRAAISTSATKFGSQLHSTVCDHVKETYLDAMERQKTKKKIDV
RRDLSQEQLQLLNDLYPERHIVSSNCERGTHSFAAASRKIETDLLLSRIPKKSWVYDIGG
NWATHIKRNDGRRVHCCCPTIDIRDSARKTVSWASIEKYLDEKDEIPTEVGERIKRVQAD
EIKIYENLKNKRAQPEDLDGKWYCGNKFEECVFRAERAYAMAIHSIYDIDLMDLANALEE
KRIKIMSGTFLFSVDLLLGKKSGSLPTMDGFFEVEGDYVKYGFKNDTNPGYKHKLSQLMK
YLTKTFVVAKGGTIYYLELTEQRGDVMFFTMTDATEARMNGVVADESFKCIPIDNKSEVV
FPIFEVDKQTDSLIFSEVLLSKDFVQRAIEFTGRLKPNQLTPDNVNTYLTSTNNTIIIGG
SSKKNTTKVDATLIQQITTTLVVWTELMNLRQKRVLEKLRLQMKDDVDFKSLAHTAFLKV
FGKVSYYQRALRCFANWLSYVHGTDAIQFHDVPLYAEVTDRVKLWKTHAPNQGFVLDMED
LDVKIKMHEVSEREKRDVSRCIVSGKLGELQIHSESSNNEEQINGDYRDSRRRTTFEDLL
EGEVATNFLDDWCEKNDHFNFSRDDAQSKYAWGLKLLKGIWEFLLPPMDFAPVYVDDEQA
RLRMVRVNERRNTSDTGADGDVAACEVAADFSKAMDTLVDVVKKMDQKKLGLVEKVKASA
VAVVELSKTKPVTGNSCAVDLWADFEKNLDDDDEPGCGISVVTKGKEICQDNVGPVLLCG
SSSCSSVSEVEKETDVVSVTDSGNSPATCCGGMVLDKSVSIAGNDVSVELPVTATTVATV
ETGTADGVIASTDESAFSDVNDKSWGSVAEEESDDTFYSCSGLISDKVKKSNLPKRPDFS
KFPTVQQKAKHEAMWYLQCKIVSDRTTLRSIIDDHLRGMFHNGTCELPKDSAFLDYTADN
CGTWMYGKPSRFGHSYGVGFSLDTRQRVSKCELVKLMWNHDSRGQVNQKPVNTRAFQYLL
LSELSFMMNEMIIYRNLQQVMRKRERSKQARITLRDGVPGCGKSTWILNNANPTKDMILS
VGKEATEDLKEKFMKKHRCVESDLKRIRTVDSFLMHDYDKYRAATVHFDEALMAHAGMVY
FCADILGAKKVICQGDSQQIPFINRVESITLQYSKLVIDETEHVRLTYRSPVDVAHYLTK
KSWYSGGRVTTKNPVMRSMKTVGPRDVKPMTSVHCVPYFKDAQYLTFTQSEKTDLYKALR
NKGPVTVNTVHETQGKTFDDVIVVRLETTENEIYPGGRKGQPYEIVATTRHRRSLVYYTA
IEDRLFEDISDMQDVMESKLMKSLCPEFDKXRFGSKYESILICDREVRVPDVGTPAILQD
FYDRVFPGNSTMDSHFDGYEVSTSDISIELENCTVQPNKNVRVWQDKRGLVPVMRTAMPP
KRQNLPVEAMLALKKRNMAAPKLQEAVNEFEVIERTINRAKEIFFNVELIDDSELSTRES
NLRWWGRQSTTARAQMKKEMRVLHEIDLCFYSYNIKGDEKPKMDRSPQHEYGALQTVVFP
DKIVNALFGPVMKEINERIRMALKPHVVYNSRMNADELNRTVEFLDPDEEYNAFEIDFSK
FDKSKTSLHIRAVIELYKLFGLNDLIALLWEKSQSRTKIRDFVYGITAYLLYQQKSGNCD
TYGSNTWSAALALLESMPLEKAKFMIFGGDDSLILFPKQQVVEDPCRRLASLWNFDCKLF
DFKHNMFCGKFLLKIGDRFKFAPDPMKLITKLGRKDIADGRLLSEIFVSIGDNFRSYRDY
RILEQLSLAVRERYKTDEDPTATLITLKKYIFDFKLWGSLFNYSGEFVESRVDRNFEW
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgatagcagttcgatacttggtattattagtgaagaggatgtcattagggcc
gccattagtactagtgcgacaaaatttggttcgcagttgcatagtactgtgtgcgatcat
gttaaagagacgtacttggacgctatggaaagacaaaaaacaaaaaagaagatagatgtg
aggcgcgacttgtcacaggaacagcttcaacttctaaatgacctttatccggagagacac
attgtgtcaagcaactgtgaaagaggtacgcacagctttgcagcggcttcgaggaaaatc
gagactgatttgttgttgagtcgtattcctaaaaaatcgtgggtctacgatattgggggc
aactgggccacgcacatcaagcgcaatgatgggcgtagggtgcattgttgttgccctact
attgacataagagattctgcgaggaagactgttagttgggcgtctatagaaaaatatttg
gatgagaaggacgagatacccaccgaagtcggtgagcgtattaagcgtgtgcaggctgat
gaaattaagatttatgagaatctgaagaataaaagggctcagcctgaagatttagatggt
aagtggtactgtggaaacaagtttgaggagtgtgtgttcagagcagagagggcttatgcg
atggctatccatagcatttatgatattgatctcatggatctggccaatgctttagaggaa
aaaagaataaagatcatgagtggcacgttcctgttttcggttgacctgttacttgggaaa
aagagcggatcactaccgaccatggatggtttctttgaggtagaaggtgactacgtaaag
tatggtttcaaaaatgatacaaacccaggttataaacataagctcagtcagctgatgaag
tatctgacgaagacttttgtcgtcgcgaaagggggaacaatttactacctagagcttact
gaacagcgaggtgatgtgatgttcttcacaatgacggatgcgacggaagcgaggatgaac
ggtgttgtggctgacgagtctttcaagtgcataccaattgataataagtctgaggttgta
tttcccatattcgaggtggataagcagactgattcgttgattttttccgaggtgttgttg
tcgaaggatttcgttcaaagggctatcgaattcacaggaaggcttaaaccgaatcaactc
actccggataatgtgaatacctatttgacttccaccaacaacactatcattattggtggt
tcatcaaaaaagaatactacgaaagtcgatgctacgttgattcagcaaattactaccact
ctggtggtttggacggagcttatgaatttgcgccaaaagagagtgttggagaagttaagg
ttgcagatgaaagacgatgtggatttcaagtcgttggcgcatactgcttttttgaaggtg
ttcggtaaagtgagctattatcagagagcgctgcgttgtttcgctaattggctttcgtac
gtgcatggcactgacgccattcaatttcacgatgtccctctgtatgcggaagtcacagac
agagtgaagttgtggaagacacacgccccaaatcagggctttgtgctcgacatggaagac
ttggatgtaaagatcaagatgcatgaggtgtccgaaagagaaaagagagatgttagtcgg
tgcatagtgtctgggaagttgggggagttacagatccattctgaatcttctaataatgaa
gaacaaatcaacggtgattatcgtgacagtcggagacgtactacttttgaagacctactg
gagggtgaagtggctacgaattttcttgatgattggtgtgagaagaatgatcatttcaat
ttttcgcgtgatgacgcccagtctaaatatgcttggggtttgaaattactgaaaggtatt
tgggagtttttactcccgcctatggatttcgcgcccgtttatgtcgatgatgagcaagca
agactaaggatggtccgtgtgaatgaaaggagaaatacttctgacactggtgctgacgga
gacgtcgcagcttgtgaagttgcagcagatttttcgaaagcgatggacacgttggttgac
gtggtgaagaagatggatcagaagaagttgggattagttgagaaggtgaaagcatctgcg
gttgctgttgtcgaactgagtaagactaaacctgttactggtaacagctgcgcggtggat
ctctgggctgattttgagaagaatttggacgacgatgatgaacccggttgtggtatttcc
gtagtgactaaaggtaaagaaatatgtcaagataatgtcggaccagtgcttttgtgtggt
agttcttcatgctcctctgttagtgaggtggagaaagaaactgatgtggttagtgtgact
gattctgggaatagtcccgccacatgctgcggaggaatggttcttgataagtcggtaagt
attgctggtaacgatgtttcggtcgaactacctgtcactgctacaactgtcgcgacagtt
gagacagggactgcggacggtgttatcgctagtacagacgagtcagcctttagtgacgtt
aacgacaagtcgtggggctcggtcgctgaggaagaaagtgatgacactttttattcatgc
tctggtctgatttcagataaagtgaagaaaagtaatttgccaaagaggccagatttctcg
aaatttcctactgtgcaacagaaggcgaaacacgaggcgatgtggtatctgcaatgcaag
atcgtttctgataggaccactctgaggagtattattgatgaccatctgcggggaatgttt
cacaatggaacttgtgaactgcctaaagattcagcttttttggactacactgccgataac
tgcgggacctggatgtacggaaaaccgtcacgttttggtcacagttatggagttggtttt
tcactggatacgaggcagagagtaagtaagtgtgaacttgtgaagttgatgtggaatcat
gacagccgtggtcaggtaaatcagaaaccagtgaatacgagagctttccagtatttactg
cttagtgagctctcctttatgatgaatgagatgataatataccgtaaccttcagcaggtg
atgcgtaaaagggagaggagtaagcaggcacgtattacattgagagatggagttcccggt
tgcggaaaatctacgtggattctgaacaatgcaaatcccacaaaagatatgattctatcg
gtgggaaaagaggcaactgaggatttaaaagagaaattcatgaaaaaacacaggtgtgta
gaatccgacttgaagaggataagaactgtggattcatttcttatgcacgattatgacaag
tacagggcagcaaccgtgcactttgatgaagcacttatggcgcacgctggtatggtgtat
ttttgtgctgatatacttggagctaagaaggtcatttgtcagggtgattctcaacaaata
ccttttattaatcgcgttgaatctatcacattgcagtactcaaagcttgtaattgacgag
actgagcatgtgcgactaacgtatagatctcctgttgacgtggctcactatctcaccaaa
aaatcgtggtacagtggaggaagggttactacaaagaaccctgtgatgagatctatgaaa
actgtaggaccgagagacgtcaaacctatgacgtcagttcactgtgttccttattttaaa
gacgcgcagtacttgacgtttacgcaatctgaaaaaactgatttgtacaaggcgctgagg
aataaaggtccagtcacagtgaataccgtgcatgagactcaaggaaaaacctttgacgat
gtcattgtggtaaggttagaaactactgaaaatgagatttacccaggtggtaggaaaggt
caaccttacgaaattgtggcaacaactagacatcgccgatcattggtttattatactgct
attgaagacaggctttttgaagatattagtgacatgcaggatgtcatggaaagcaaactc
atgaagagtttgtgtcctgaattcgacaaatgacggtttgggtcgaaatatgagtccatc
ttaatatgtgatagagaggtaagggtacccgacgtaggaacacctgcaattttgcaggac
ttctacgacagggtgtttcctggaaattcaacgatggattcacatttcgacgggtatgaa
gtttctacttctgacataagcatcgaattggagaactgcacagtacaacccaacaaaaac
gttagggtgtggcaagacaagaggggtttggtgccggtgatgcggactgctatgccgcct
aaacgacagaatcttccggttgaggccatgttagcgttgaaaaaacggaatatggcagca
ccgaaattgcaagaggcggtcaatgaatttgaggtgatagagaggactataaatcgggcc
aaagagatctttttcaatgtggaattgatcgacgacagtgaactttctactagagaatcc
aacttgcgttggtggggaagacaatctacgaccgcgagggcgcagatgaaaaaagaaatg
cgggtattgcatgagatagacctgtgtttttacagttacaacatcaaaggtgatgagaaa
cctaagatggacagatcaccccagcacgaatacggagcgttacagacggtggtgtttccc
gataaaattgtaaacgctcttttcggtccggtcatgaaggaaatcaatgagcgtatcaga
atggctttgaaaccgcatgttgtatacaattctagaatgaatgccgacgagctcaaccgt
acagttgagttcttagatccagatgaagaatacaatgcgtttgaaatcgatttttcaaaa
ttcgacaaatcaaaaacgtcattgcacattcgagcggttatcgagctatacaagcttttc
ggtctgaatgatttgatcgcccttctgtgggagaaatcgcaatctcggactaagataagg
gactttgtatatggtattaccgcatatttgctttatcagcagaaatccggtaattgcgac
acttatggttcaaacacatggtccgcggcgttggcgttgttggaatcaatgccattggaa
aaagcaaagtttatgatctttggaggtgacgactcattgatcctttttccaaaacaacag
gttgtagaagatccctgcaggaggcttgcctcactgtggaacttcgactgcaaactgttt
gattttaagcataacatgttctgtgggaaattcttgcttaagatcggggacaggttcaaa
tttgcacctgaccctatgaagttgattacgaaactgggtcgtaaggatattgctgatggg
agattgctgtccgagatttttgtgtctattggagataatttccggtcttaccgggattac
aggatactcgaacaactttctttggccgtacgggaaaggtacaagactgatgaagatccg
acggctacgttgattactttgaagaagtacatcttcgattttaagctttggggtagtttg
tttaattatagtggtgagtttgtggagagtagagtagataggaactttgaatggtaa
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