Vibrio gazogenes: BSQ33_00165
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Entry
BSQ33_00165 CDS
T04933
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
vga
Vibrio gazogenes
Pathway
vga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSQ33_00165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_00165
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSQ33_00165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
HHH_5
HHH
UVR
HHH_3
HHH_2
5_3_exonuc
DUF7508
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
ASA54290
UniProt:
A0A1Z2SAU7
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Position
1:34371..36203
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AA seq
610 aa
AA seq
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MTQAFDPSSFLATVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLSSYFRKTLDNEKTKALV
SHIARIDVTVTHTETEALILEHNYIKQYMPKYNVLLRDDKSYPYIFVSAHKHPRVSVYRG
AKKRKGEYFGPYPDAGAVRETLHLIQKIFPVRQCEDSVYGHRTRPCLMYQIGRCAGPCVS
DLISDQSYQELVDDLRLFLRGKDQQVVAMLVDRMTAASEALRFEDAAKYRDQIQAIRRIQ
EQQFVSADSLDDIDVLGFSQENGLACIHVLMIRQGKILGSRSFFPKIPGNTTHEEVFESF
LKQYYLSHNESRTLPTKVIVNRGLLEDIQVFQALLTEMAGRKVQFFVEPSGVRGRYLKLA
NTNAQTAITTRQNHRMTILQRVKALQDELEMEQIQRMECFDISHTMGESTIASCVVFNQD
GPVKQEYRRYNITGITGGDDYAAMGQVLERRYSKQIDVDKIPDIIFIDGGKGQLSRAHQI
VSRYWDDWPKRPLLMGIAKGVTRKPGLETLLTVEGDEFHLANDAPALHLIQHIRDESHNH
AISGHRNKRGKTRRTSALEGIEGIGPKRRQALLQFMGGLQELKRASVEEIAKVPGISRSL
AENIHQALKQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaagcatttgacccttcttcttttttagcaactgtaaccaatcagcctggtgtt
tatcggatgtataatgccgaggctgaggtgatttatgttggtaaagcgaaagatcttaaa
aaacggttatccagttactttcgtaagacgttggataacgaaaagactaaagcgttagtc
agtcatattgccagaatagatgtgacggtgacgcataccgaaactgaagcgctcattctg
gagcacaattacatcaagcaatacatgcctaagtacaatgtactattgcgtgatgataag
tcttatccttatatttttgtcagtgctcacaagcatccgagagtgtcggtataccgtggg
gcaaaaaagagaaagggagagtatttcggcccttatcctgatgccggtgccgttcgtgaa
acgctgcatttaattcagaaaatattccctgttcgacaatgtgaagattcggtctatggt
catcggactcgtccttgtctgatgtatcagattggtcgttgtgccggtccgtgtgtttcg
gatttgatttcggatcagtcctatcaagagttggtcgatgacttgcgtttgtttttacgt
ggtaaagatcaacaggttgttgcaatgctggtggacagaatgaccgctgccagtgaggcg
ttacgttttgaagatgcagcgaaataccgcgatcagattcaggcgattcgccgcattcag
gagcagcaattcgtgtcggccgatagcttggacgatattgatgtgctgggattctcgcag
gaaaatggcctagcatgtattcatgtattaatgattcggcaggggaaaattctcggcagc
cgaagctttttccctaaaattcctggcaataccacgcacgaagaagtgtttgaaagcttc
ctcaaacagtattatctctctcataacgagtcgcgaacactgccgactaaagtgattgtg
aatcggggattgctggaggatattcaagtttttcaggcactattgacggagatggccggg
cgaaaagtacagttttttgtcgaaccatccggcgtgcgcgggcgatacctgaagttggcg
aataccaatgcccagactgcgattaccactcgtcagaatcatcgtatgacgattttacaa
cgggtcaaagcacttcaggatgaattagagatggagcagattcaacggatggaatgtttt
gatatctcccatacgatgggggaaagcaccatcgcatcctgtgtcgtgtttaatcaggac
ggtccggttaagcaggaatatcgtcgttataatatcaccggtattactggtggagatgat
tatgccgcgatggggcaggttctcgaacgtcgttattcaaagcagatcgacgtcgataaa
attccggatattatcttcattgatgggggtaaaggtcagctatctcgtgcacatcagatt
gtatcgcgctactgggatgattggccaaagcggcctttattgatgggcatcgccaaaggt
gtgacccgtaaacccgggctggaaaccttgctgactgttgaaggcgatgaatttcatctg
gcgaatgatgcgccggcattgcatttaattcaacacatccgcgacgaaagtcataaccat
gcgattagtggtcaccgtaataagcgtggtaaaactcggcgaaccagtgctctggaaggt
attgaaggaatcggaccgaaacgacgtcaggcgctgttgcagtttatgggtggattacaa
gaactcaaacgtgccagtgttgaagaaatcgccaaagttccgggtatcagccgatctttg
gcagaaaatatccatcaagcattgaaacaatag
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