Vibrio gazogenes: BSQ33_00285
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Entry
BSQ33_00285 CDS
T04933
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vga
Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vga03009
]
BSQ33_00285
Enzymes [BR:
vga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BSQ33_00285
Ribosome biogenesis [BR:
vga03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BSQ33_00285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ASA54313
UniProt:
A0A1Z2SAW4
LinkDB
All DBs
Position
1:60108..60821
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AA seq
237 aa
AA seq
DB search
MRLDKFLCDALGITRKEATKVIKQGEVCVNEQVQKSGALKLTAADEVTWQDQPIQLHGPK
YIMLYKPEGYVCSHEDGFNETAFMLLDEPHLKHLHFAGRLDVDTTGLVLITDDGQWSHRV
TSPKHQCAKVYHVWLADPIAEDAVAQFQQGIQLRNERELTLPAQLDILDEKEARLKIYEG
KYHQVKRMFAATGNKVVGLHREQVGQIRLDETLAPGEYRYLTEAEVQSVWESQSTDD
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggataaatttttatgtgatgctttaggcatcacacgtaaagaagcaacaaag
gtcatcaaacagggtgaggtttgtgtcaatgaacaggtccaaaaaagtggcgcgctgaaa
ctgacagcagcagatgaagtcacgtggcaggatcaacccatacagttgcacgggcctaaa
tatatcatgttgtacaagcccgaaggttatgtgtgctcccacgaagatggctttaatgaa
accgcttttatgttgctcgatgagcctcacctgaaacatttgcattttgcagggcggttg
gacgtggatacgactggacttgtattgattaccgatgatggtcagtggtctcaccgggtg
acgtctcccaagcatcaatgtgccaaggtttatcatgtatggctggctgatccgattgcc
gaagatgcggttgcccaatttcaacaggggattcagttacgtaatgaacgggaactgact
ttaccggctcagcttgacattctggatgaaaaggaagctcgcctgaaaatttatgaaggc
aaatatcatcaggtgaaacgcatgtttgctgccactggcaacaaagttgtcgggttacac
cgggagcaagtcggacaaatccgtctcgatgagacgctggctccgggtgagtatcggtat
ctgaccgaagctgaagtgcagtcagtctgggaatcccagtctacggatgattag
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