Vibrio gazogenes: BSQ33_04115
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Entry
BSQ33_04115 CDS
T04933
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vga
Vibrio gazogenes
Pathway
vga02020
Two-component system
vga02040
Flagellar assembly
vga05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSQ33_04115
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
BSQ33_04115
09142 Cell motility
02040 Flagellar assembly
BSQ33_04115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vga02022
]
BSQ33_04115
02035 Bacterial motility proteins [BR:
vga02035
]
BSQ33_04115
Two-component system [BR:
vga02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
BSQ33_04115
Bacterial motility proteins [BR:
vga02035
]
Flagellar system
Flagellar assembly proteins
Others
BSQ33_04115
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
HTH_20
DUF2089
Mg_chelatase
MerR
AAA_16
HTH_24
AAA_19
HTH_11
FleQ
MCM
AAA_3
HTH_Crp_2
AAA_7
KorB_C
HTH_28
AAA
Sigma70_r4_2
HTH_5
HTH_10
nSTAND3
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ASA54991
UniProt:
A0A1Z2SCY6
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All DBs
Position
1:complement(909438..910865)
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AA seq
475 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALVDTLALAGYEWVEADCAEEALVKLKSESVDIVVSDVQMAGM
GGLALLRNIKQHWPNLPVLLMTAYANIEDAVAAMKEGAIDYMAKPFAPEVLLNMVSRYAP
VKSDDNGDAVVADEKSVKLLALAEKVAKTDANVMILGPSGSGKEVMSRYIHNASLRKDGP
FIAINCAAIPDNMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEISEMDLNLQAK
LLRVLQEREVERLGSRKSIQLDVRVLATSNRDLKSYVQEGEFREDLYYRLNVFPISWPAL
RERQDDIKPLAQHLVERHCKKLGIAMPQIATSAIEKLLSYPWPGNVRELDNVIQRALILS
ENGNIDEEHILLEGVDWKDAGSLQKLVENDQPRPTSQPVEPPTVKTVAHSEMSSHQSSIS
DLGGELRDQEYSIILETLIACKGRRKEMAERLGISPRTLRYKLAKMRDAGIDIPG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagcaaagtattaattgttgaagatgatgaaggtttgcgcgaggcattggtg
gataccttagctctggccggttatgaatgggtcgaagcagattgtgctgaagaagcactg
gtaaagttaaaatcagagagcgttgatatcgtggtctctgatgtgcaaatggcgggtatg
ggtggtttggcactgttgagaaatatcaaacagcattggccgaatcttcccgtactactc
atgacagcctatgccaatattgaagatgccgttgcagcgatgaaagagggtgccattgat
tatatggcgaaaccattcgcacccgaagtgttgctgaatatggttagccgttatgcaccg
gttaaatctgatgacaatggcgatgcggttgttgctgatgagaaaagtgtcaaattactc
gctttagcagagaaagtcgctaaaaccgatgcaaatgtcatgattctcgggccgagtggt
tccggaaaagaggtgatgtctcgctacattcacaatgcgtcattgcgtaaagatggtcct
tttatcgcgatcaattgtgctgcgataccggataatatgttggaagcgactctgtttggt
tatgagaaaggggctttcaccggtgctatccaagcttgtcccggaaaatttgaacaagca
caaggcgggaccattctactcgatgaaatcagtgaaatggatttgaaccttcaggcgaag
ttgttgcgggtgctacaggaaagagaagtagaacggctgggaagtcgtaaaagtattcag
ttggatgtcagagtgcttgcgaccagtaaccgcgatttaaaaagctatgttcaggaaggt
gaatttcgtgaagatttatactatcgcttgaacgttttcccaatttcatggccagcgctg
cgagagcgtcaggatgacatcaaacctttggcgcagcatctggttgaacgtcactgtaaa
aaactgggcattgcaatgccccagatcgcaacatccgcaattgaaaaactactctcttat
ccgtggcccggtaacgtacgtgaactggataatgtcattcagagagctttgattttgagt
gaaaatggcaatatcgacgaagaacatatcctcttggaaggggtcgattggaaagatgcc
ggcagtttacaaaaattagttgaaaatgatcagccgcgcccaacatcacaaccggttgaa
ccaccgactgtcaaaacagtggctcatagtgagatgagtagccatcagtcaagtatttct
gatttgggtggagagcttcgcgatcaggaatattccattattctggagaccctgatcgcc
tgtaaagggcggcggaaagagatggcagagcggttggggattagtccgagaaccttgcgc
tataagctggcgaagatgagagatgcagggattgatattcccggataa
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