Vibrio gazogenes: BSQ33_04990
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Entry
BSQ33_04990 CDS
T04933
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vga
Vibrio gazogenes
Pathway
vga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BSQ33_04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_04990
Enzymes [BR:
vga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BSQ33_04990
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSQ33_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
SH3_13
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
SLFN-g3_helicase
nSTAND3
AAA_16
CbiA
DEAD
AAA_28
PhoH
PIF1
TrwB_AAD_bind
NTPase_1
UvrD_C
MukB
T2SSE
ResIII
NPHP3_N
FtsK_SpoIIIE
DO-GTPase1
DUF87
SRP54
AAA_7
AAA_5
AAA
Motif
Other DBs
NCBI-ProteinID:
ASA55141
UniProt:
A0A1Z2SDD3
LinkDB
All DBs
Position
1:complement(1077737..1079821)
Genome browser
AA seq
694 aa
AA seq
DB search
MIQLAQSLASLAEKRVIRPLDQQFARFIAHQCSQDQAAVAWLAALVSYELGRGHICVPLV
GDEGQVVRSQLLFGHAVTELHTVRDCVESLDWLAVLTRCPLIGEPGSYLPLIFDGKRLYL
QRYWFYEHQLALRLQGLSSPVLNDTAQTEYLAETLNQLFPRPYDSLFEALQQVSSVGERQ
RLVCEYLDVVQESALDWTSIDELLQQASGGSALSGLNTLVPESVCLNWQKVAAAIALSRR
FAVISGGPGTGKTTTVARLLAALVSQNHAVQQKLVIKLVAPTGKAAARLTESISQAVERL
TIPTEMKARIPTQASTLHRLLGAIPNSAEFRHHQHNPLHVDLLVVDEASMIDLPMMYKLL
MALPDHARLVLLGDKDQLASVEAGAVLGDICAFQTQGYSRSQITQLARLTGYQFASPLPH
QDVPPLADSLCLLQKSYRFHARSGIGQLAKAVNSGDVSQLFQITQQSYADVQIHGLDSES
YHQMLQTLVAEYAHYLHAIADQSAIAAGTTPEKKAEYVLRLFHRCRLLCAIRDGDFGVTG
VNQRVERALSRHKLIRKSDEPWYEGRPVMITRNDHHLELYNGDIGICMRDPQDDRLKVYF
EQFDGHVRGFLPSRIPQHETAYAMTIHKSQGSEFDFTLLLLPPDHTPLLTRELVYTGITR
ARKRLALFTSPKILQAAVRVKTQRVSGLREKMAE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgatccaactggctcagtctctggcatcgttagctgaaaaacgtgtgattcgtccgttg
gatcagcaatttgcccgttttattgctcatcagtgctcacaagatcaggctgcggtggca
tggctcgctgcgctggtgagttatgaactgggtcgcggacacatttgtgtaccactggtg
ggtgatgaagggcaagtggtgcggtcgcaattattattcggtcatgcggttactgagttg
cacacggtcagagactgtgttgaatcacttgattggttggcggtactgacgcgttgccca
ttgattggcgagccgggcagttatttgcccctgatctttgatggaaaacgactttatctc
cagcgttattggttctatgagcatcagttggcgttgcgcttgcagggattgtcatcaccc
gttctgaacgatacggcacaaactgaatatttagctgaaacgttaaatcaattatttccc
cgtccctatgacagcttatttgaggcactacaacaggtgtcgtcagtgggagagcggcag
cgtctggtctgtgaatatctcgatgttgttcaagaatctgcattggactggacgtcgatt
gatgaattattacagcaagcatccggtggttcggcactttcagggctaaatacgttggtg
ccggaatcggtatgtctgaattggcagaaggtcgcagccgcgattgcgttaagtcgccgt
tttgccgtcatttccggtgggccgggcacggggaaaaccacgaccgtcgcgcggttgctg
gcggcattggtgagtcagaatcatgcggttcagcagaagttggtgattaagctggttgcc
ccgacgggaaaggctgcggcacggttgactgaatcgatcagtcaggcggttgaacgattg
accattcctacggagatgaaagcacggataccgactcaggcaagtacgttgcaccggtta
ttaggtgcgattccgaatagtgccgagtttcgccatcaccagcacaatccacttcatgtc
gatttgctggtggttgatgaggcgtcgatgatcgatttgccaatgatgtataagttattg
atggccttacctgatcatgctcgtttggtgctattgggcgataaggatcagttagcttct
gttgaggccggagcggtgttaggcgatatttgtgcgtttcagactcagggatatagccgg
agtcaaatcactcagttggctcggttaacgggataccaatttgcttcaccactccctcat
caagacgtgccgccactggcggacagtttgtgcctattacagaaaagttaccggtttcat
gctcgctccgggatcggacaactggccaaagcggtgaattcaggtgatgtatcccagttg
tttcagataacacaacaaagctacgctgatgtacaaattcatgggttggatagtgaaagc
tatcatcaaatgttacagacgttggttgccgagtatgcacattacttgcacgcgattgcg
gatcaatctgcaatcgcggcggggaccacgcctgagaaaaaagcggaatatgtactgcgg
ttattccatcgttgtcgattattgtgcgcgattagagatggcgactttggtgtgacaggt
gttaatcagagagtggagcgagccttaagtcgtcataaactgattcgtaaaagtgatgaa
ccgtggtatgaaggtcgtccggtaatgattacccgtaatgatcaccatcttgagttatat
aatggggatatcggcatttgtatgcgagatcctcaggatgatcggctaaaggtctatttt
gaacagtttgacggccatgtccgaggttttctgccaagccggattcctcaacatgagacc
gcttacgccatgacaatccataagtcgcagggcagcgaatttgattttacattgttgctg
ctaccaccggatcataccccgcttttaacgcgggagttggtttataccggtattactcgg
gcgagaaagcggttggctctctttacgtctcccaaaatcttgcaggcagctgtcagggtg
aaaacacagcgagtgagtggtttaagagaaaaaatggcggagtga
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