Vibrio gazogenes: BSQ33_05065
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Entry
BSQ33_05065 CDS
T04933
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vga
Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_05065
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BSQ33_05065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
GvpD_P-loop
AAA
SLFN-g3_helicase
AAA_22
AAA_16
nSTAND3
Rad51
NTPase_1
RecA
Zeta_toxin
AAA_14
AAA_24
AAA_5
Zn_ribbon_Thio2
AAA_29
ABC_tran
Viral_helicase1
DAP3
NACHT
Zn_ribbon_8
YIEGIA_cap
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ASA55153
UniProt:
A0A1Z2SD94
LinkDB
All DBs
Position
1:complement(1100118..1101497)
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AA seq
459 aa
AA seq
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MAKTKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRLAASPQVSRNERLSGYAGGVTET
KVQTLADIDLQELPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQVMCYLAS
GVPTLYVTGEESLQQVAMRASRLGLPKDRLRMLSETSVDRICQIAAQEQPKIMVIDSIQV
MHMADVQSSPGSVSQVRESATALTRYAKQNHVALFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLMMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRALPKDVVIFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIIPHANMPKGGIEGMQIHAVKKLADAIQAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacaaaaagagcatacgtttgtaatgattgtggtgcggattttcctcgctgg
caagggcaatgtaatgcatgtggtgcatggaataccattacagaagtcaggctggcggcc
tctcctcaggtttctcggaatgagcgattgagtggttatgcaggtggcgtgacagaaacg
aaggttcaaacactggctgatattgacctacaagaattgcctcgttttaccagtgggttc
aaagagttagaccgtgttttgggtggcggtgttgtccccggtgccgctattttgatcggt
ggtaatcctggggccgggaaatccacgttattgttacaggtcatgtgttatctcgccagt
ggggttccgacgttgtatgtcacaggtgaagaatcgctccagcaggttgcaatgcgcgcg
tctcgtttgggattgccgaaagatcggctccgcatgttatcagaaaccagtgttgaccga
atttgccagattgcagcacaagaacagccgaagattatggtgattgactcgattcaagtc
atgcatatggctgatgttcagtcatcgccgggcagtgtgtctcaagtccgggagtctgct
acagcattaactcgctatgcgaaacaaaatcatgtagcactatttattgtcggtcacgta
acaaaagatgggacgctagccggcccgaaagtgcttgaacatattattgattgctcagtg
ttattggatggcgggaccgacagtcgttttaggacgctcagaagtcataaaaaccgcttc
ggggcggtgaacgagctgggcgtttttgcgatgaccggacaggggatgagagaagtcagt
aatccctctgctatatttttatccagaggtgaagaagaaacatccggtagttcagtcatg
gttgtctgggaaggcacgaggccactcttagttgagattcaagcattggtggattactcg
caacttgcgaacccacgccgggtggctgtcggccttgaacaaaaccgtctttctttactt
ctggcggtgttacataagcacggtggtctgatgatggctgatcaagatgtgtttgtgaat
gtggtcggtggtgtgaaagtcactgaaactagtgcggatctggcactggtgatggcatta
ctatcgagttttcgggatcgggctttacccaaagatgtggtcatttttggggaagttggt
cttgcgggagagattcgccctgtaccgagtggtcaggagcggttaaatgaagcttttaaa
catggatttaaaaaagccattattcctcatgcaaatatgccgaaaggtggtattgaaggg
atgcaaatccatgcggtgaaaaaattggccgatgcgattcaggcatttgatgagctttaa
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