Vibrio gazogenes: BSQ33_05635
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Entry
BSQ33_05635 CDS
T04933
Name
(GenBank) exopolygalacturonate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
vga
Vibrio gazogenes
Pathway
vga00040
Pentose and glucuronate interconversions
vga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BSQ33_05635
Enzymes [BR:
vga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
BSQ33_05635
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ASA57098
UniProt:
A0A1Z2SIT3
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All DBs
Position
1:1230633..1232861
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AA seq
742 aa
AA seq
DB search
MKLHRTTLLMTSILSLSACSQYSALPAPQDLTWQAITFGQSTDLNFASTILPEKVGLNAV
TLNGQPVQPGPLLNTFTIESRGGKLANSHEGMTYYYTKLPANANFTLSATITLNQLGPET
GSTPNRQEGAGIMVRDILGSPRLDPQPPGAEEFPSASNMVMNALRANKKKSNGRINVNAT
YREGVYQPWGTKGNHIVRNEFVKGVPYGNNIAYQMSLSRTDTGYTATYHYGDMSESHHIK
GANTNIIAMQDPKTQYVGFFASRNAKVTISNAHLTVQPATLTNAPAYHPQPASLVLQPAS
PKQSATTDYLFQSRASDTGEFTLYQDGKLLVKNQKVPAGQLFSVNTDLTTAKTQFSLHFT
PGSGSNHAPQQYQQTVTKVALKDPTHLLVNPNGNHGRLTLADAIRQLPPGGTITLEDGEY
GALNIPLTASGQANQIKTLKAGGDHVRFTGDITHHANYWHVSHLEVAGARYIVYGSHNTF
DRIITHDASDTGFQITSPAKSPRAFWASHNLVRDSQSYNNMDPSQINADGFAAKMRIGNG
NTFIRCISHHNIDDGWDLFNKVEDGPNGVVTIIDSIAYKNGQTLQVKARGGSRGNGFKLG
GEGLPVAHIIKNNLAYQNNMDGFTDNFNPGRLTLENNVAIDNKRFNFLIRKSPYTETQKQ
GTFVGNRSYRFYSTSPYDDVVHADIRRNNTLIVDGQPTDDNGEHPKQVMLSKLKQAAKIS
SQAPIPGQMAVHNIRTWLHQHP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcacagaacgacattactcatgacgtcgattttgtctttatctgcctgctca
caatatagcgccctccccgcccctcaggacttaacttggcaggcgatcaccttcggccag
tcaaccgatctgaattttgcatcgacaattttaccggaaaaagtcggactcaatgctgtc
actctcaatggtcaacctgtacaaccaggcccactgctcaacacatttaccattgaaagt
cgtggtggcaaactggcgaattcacatgaaggcatgacttattactacacgaaactcccg
gccaacgcgaacttcactttatcagcaacgatcacgctcaaccaacttggtccggaaaca
ggatcaaccccaaaccgtcaggaaggggcaggtatcatggtccgtgatattcttggttct
ccacgtttagatcctcagcctcccggtgcagaggaattcccctctgcatcaaatatggta
atgaatgccttgcgcgccaataaaaagaaaagcaacgggcggatcaatgtcaatgccacc
taccgggaaggggtttaccaaccttggggaaccaaaggaaaccacatcgtccgaaatgaa
tttgtcaaaggggttccctatgggaacaacatcgcctaccagatgtcactgagccggacg
gatacaggctataccgcgacctatcattatggtgacatgagtgaaagccatcacatcaaa
ggcgcgaataccaatatcatcgccatgcaggatccaaaaactcaatacgttggttttttt
gcttcacgtaatgccaaagtcaccatcagcaatgctcatctgacggttcagccggcgacg
ctgaccaatgcaccggcttatcaccctcaacccgcatcattggtactgcaaccggcatct
cccaaacagtcggccacaacggattatctgtttcagtcacgtgccagtgacaccggtgaa
tttaccctctaccaagacggtaagttactggttaaaaatcaaaaagtgccggcaggtcaa
ctgttcagtgtgaacacagacttaacaacggcaaaaacgcaattttcactccactttacc
cctgggtcgggctcaaatcatgcccctcagcagtatcagcaaaccgtcactaaagtggca
ctcaaagatccaacgcacctcctcgtcaacccgaatggcaatcatggccgccttactctc
gcagatgcgattcgacaactccctccgggtggtacaatcacactcgaagatggcgaatat
ggggctctgaacattccactgactgcaagtggacaagcgaatcagatcaaaacgctaaaa
gccggtggggatcatgttcgttttacaggagatatcacccatcatgcaaactactggcat
gtctctcaccttgaagttgctggggcgcgttacattgtctacggtagccacaatacattt
gatcgcattatcactcatgatgcatcagataccggttttcaaattacctcaccggcaaaa
tctccccgtgcattttgggcgagtcataaccttgttcgagacagtcaaagctataacaac
atggatccatcccagatcaatgccgacggcttcgcggcaaaaatgcgtatcggtaacggc
aataccttcatccgttgtatttctcaccacaatatcgatgatggctgggatctattcaat
aaagtagaagacggacccaatggcgttgtaacgatcatcgattcgatcgcttataaaaat
ggtcagacgctacaagtgaaagccagaggcggcagccgaggaaacggatttaaacttggc
ggagaggggttacctgtcgcacacatcatcaaaaataaccttgcctatcaaaacaatatg
gacggttttaccgataattttaacccgggtcgtttaacccttgaaaacaacgtcgccatt
gacaataagcgcttcaatttcctgatcagaaagagcccttataccgagactcagaaacaa
ggaaccttcgttggcaatcgttcttatcggttctattctaccagcccatatgatgatgtc
gttcacgcggatatccgtcggaataatacgctgattgttgatgggcaaccgaccgatgat
aacggagagcaccctaagcaggtcatgctatctaaattgaaacaggctgccaaaatttct
tctcaagcgccaatccccggtcaaatggcggttcacaatatccggacatggctgcatcag
cacccctga
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