Vibrio gazogenes: BSQ33_05645
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Entry
BSQ33_05645 CDS
T04933
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
vga
Vibrio gazogenes
Pathway
vga00040
Pentose and glucuronate interconversions
vga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BSQ33_05645
Enzymes [BR:
vga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
BSQ33_05645
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Motif
Other DBs
NCBI-ProteinID:
ASA55255
UniProt:
A0A1Z2SDL7
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Position
1:1235049..1236212
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AA seq
387 aa
AA seq
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MAKGDVINLDFESFIDSDTQVKVTRLTPKNVICHRNYFYQKCFTQDGQKLLFAGDFDTNR
NYYLLDLTTQQATQLTEGSGDNTFGGFISSDEQSFFYVKNERNLMKVDFKTLEETLIYTV
DEAWKGYGTWVANSDCTKLVGIEIHKDSWQPLTSWEKFAEFYHTNPTCRLIQVDIATGDV
NVIHQEDAWLGHPIYRPFDDQTIGFCHEGPHDLVDARMWLVDGDGSHVRKVKSHAPGESC
THEFWIPDGSAMAYVSYLKGQTERVICRVDPQTLVNEVVMEMPPCSHLMSNFDGSLMVGD
GCDTPPDVNDTDSYNIENDPFLYILNTRKKTFARLAKHSTSWQVLDGDRQITHPHPSFTP
NDQGVLFTSDFEGVPAVYIADLPSKLK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtgatgtaatcaaccttgattttgaaagcttcatcgattcagatacgcaa
gtcaaggtgacacgactgacacccaagaatgtgatatgccatcgcaactatttttatcag
aaatgttttacccaagacggacagaaattgctatttgccggagatttcgacaccaatcga
aattactatctgctcgatctcaccacccaacaggcaacacaactgacagaaggcagcggc
gataacactttcggtgggtttatttcatccgatgagcaaagcttcttctatgtcaaaaat
gaacgcaacttaatgaaagttgattttaagactctcgaagaaacgctgatttacaccgta
gatgaagcgtggaaaggttacggtacatgggtggcgaattcagactgtaccaaactggtt
ggcatcgaaattcataaagacagttggcaaccgctcacatcatgggaaaaatttgctgag
ttttatcataccaatccgacttgtcgcctgattcaagtcgatattgcgacgggtgatgtc
aacgtcatccaccaggaagatgcctggctgggacatccgatctatcgtccgtttgatgat
caaaccatcgggttctgccatgaagggcctcatgatcttgtcgatgcgagaatgtggctg
gtggacggtgacggcagccatgtccgcaaagtcaaatctcatgcgccgggagagtcctgt
actcatgagttctggattccggatggaagcgcgatggcgtacgtgtcctacctaaaaggg
caaaccgaacgggtcatatgtcgagtcgatccccaaacgttagtcaatgaagtcgtaatg
gaaatgccaccgtgttctcatttgatgagtaactttgatggctcgctgatggtcggtgac
ggatgtgataccccaccggatgtgaacgacaccgatagctacaatatcgagaatgatcct
ttcctctatattctcaatacacgcaagaaaacgttcgcccgattggcaaaacacagtacc
tcttggcaagtacttgatggtgatcgtcaaatcacgcatccccacccttcatttaccccc
aatgatcagggggtgttatttaccagtgactttgaaggagtaccagcggtatacattgct
gacctacccagcaagctcaaataa
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