Vibrio gazogenes: BSQ33_08300
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Entry
BSQ33_08300 CDS
T04933
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vga
Vibrio gazogenes
Pathway
vga03030
DNA replication
vga03410
Base excision repair
vga03420
Nucleotide excision repair
vga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSQ33_08300
03410 Base excision repair
BSQ33_08300
03420 Nucleotide excision repair
BSQ33_08300
03440 Homologous recombination
BSQ33_08300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vga03032
]
BSQ33_08300
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_08300
Enzymes [BR:
vga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSQ33_08300
DNA replication proteins [BR:
vga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSQ33_08300
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BSQ33_08300
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSQ33_08300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ASA55703
UniProt:
A0A1Z2SEU1
LinkDB
All DBs
Position
1:complement(1824548..1827319)
Genome browser
AA seq
923 aa
AA seq
DB search
MAHIPDNPLILIDGSSYLYRAFHAYPSTMSNGEIPTNAVYGVINMIRSMMRQYPSERIAV
VFDAKGKTFRDEMYAEYKANRPPMPDELRCQIEPLHKIIRSMGLPLIAIEGVEADDVIGT
IAMQATNADVPVLISTGDKDMAQLVNDKVTLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYQNLDKIADLGFRGSKTMAKKLEENK
DNAWLSYQLATIKLDVELEDTLDTLVKRPADREALIQQYGQLTFKSWLNELIESPEGSPE
INQASDAASVTMDTSAVNIDRSQYQTVLSESDFMAWLDKLKNASLFAFDTETDGLDYMTA
NLVGVSFAINEGEAAYVPVAHDYMDAPEQLDRDWVLAQLKPILEDEHSHKVGQNLKFDMS
ILARYDIELRGIEHDTMLASYVYDSVGGRHDMDSLALRFLQHSCISFEQIAGKGKNQLTF
NQIDLEQAGVYAAEDADVTLRLHHRLMDNLAQNEALLRVYQEIEVPLVPVLSRMERTGVH
IDDMRLNVQSQEIAQRLEALESKAFEIAGESFNLSSPKQLQRIFFEKMGLPVVKKTPSGT
PSTNEEVLQELALDYPLPKVILEHRGLAKLKSTYTDKLPKMINPVTGRVHTSYHQAVTAT
GRLSSTDPNLQNIPVRNEEGRRIRQAFVTEPGWKIVAIDYSQIELRIMAHLSGDQSLLDA
FQQGKDIHAATAAEILGTSLDQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRSEAQS
YMERYFERYPGVMQYMEDTRAQASEQGYVETLFGRRLHLPEIRSGNGMRRKAAERAAINA
PMQGTAADIIKKAMLLVDAWIEQEGQGRVRLLMQVHDELVFEIQESSLTEIESKIQKLME
SAATLRVPLVAEVGRGDSWEQAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcccatattcctgataacccgctcattctgattgacggttcttcttatctttatcgt
gcattccatgcctatccaagcaccatgagtaatggtgaaatccccaccaatgccgtttat
ggtgtcattaatatgatccgtagcatgatgcgtcagtatccttcggagcggattgccgtt
gtgtttgatgcaaaaggcaaaacgttccgtgatgagatgtacgcagaatataaagccaat
cgcccaccaatgccggatgaattacgttgtcagattgaaccgttgcataagattatccgt
tctatggggttaccgttaatcgcgatcgaaggtgtggaagccgacgatgtgatcgggacg
atcgcgatgcaagcaaccaatgccgatgttccggtgctgattagcacgggtgataaagat
atggcgcaattggtgaatgataaagtgaccttgatcaacaccatgacgaatgtcgtgatg
gatcgcgaaggcgtgatagagaagttcgggatacctccggaactcatcatcgactatctg
gcgttgatgggcgataaagttgataacattccgggcgtgccgggtgttggtgaaaagaca
gcgactgcattgcttcagggaatcggcggtctggaagcgctctatcagaatctcgataaa
attgctgatttgggattccggggttccaaaacaatggcgaagaagctggaagagaataaa
gacaatgcatggctttcttaccaactcgcgacgattaaactagatgttgagctggaagat
actctggatacgttggtcaagcgtcctgcggatcgagaagcgctgattcagcagtatggg
caactgacatttaaatcttggctgaatgaactgattgaaagcccggagggaagccctgaa
ataaatcaggcatctgatgcggcttcggtaacaatggatacttcagcggtcaatattgat
cgcagccagtatcagaccgttttgagtgaatctgattttatggcttggctagacaagcta
aaaaatgcatctctgtttgctttcgataccgaaacggatggattggattatatgacagcc
aatctcgttggggtgtcatttgcaatcaatgaaggtgaagcggcctatgtgccggttgcg
catgattatatggatgcaccggagcagttggatcgcgattgggtattggcccaacttaag
ccgattctggaagatgaacacagccataaagtcggacagaacctgaagtttgatatgagt
atcttggctcgttatgacattgaattacgtgggattgagcatgataccatgctggcttct
tacgtatatgacagtgtgggcggacggcatgatatggatagtctggcgctccgttttctg
caacatagttgtatttcattcgagcaaattgccggcaaaggtaaaaatcagctgacattt
aaccaaatcgatctggaacaagcgggcgtttacgcagcagaagatgcggatgtcacgctc
cggttgcaccaccgcctgatggataacttggcgcagaatgaagcactgttgcgcgtctat
caagagattgaagtgccattggttcccgtgctgtcaaggatggagagaacaggtgtccat
atcgatgatatgcggttgaatgttcagtctcaggaaattgctcagcggctagaggcattg
gagagcaaggcatttgaaattgccggagagtcatttaatttgagttctccaaagcagcta
caacgtattttctttgaaaaaatggggctgccggtcgtgaaaaaaacaccttccggaacg
ccatcaaccaatgaagaagttttacaggagctggctctcgattatccgttgccgaaagtg
attctggagcatcgtggtctggcgaaactgaaatcgacttacaccgataagttacccaaa
atgattaatccggtgactgggcgcgtacatacctcttatcatcaagcggtgaccgcaacc
ggacggctgtcatcaaccgatccgaatttacagaatattccggtacggaatgaagaagga
cggcggattcgtcaggcatttgtcactgaacccggttggaagattgtcgcgatcgactat
tctcagattgagttgagaatcatggcacatctgtcaggtgatcagtctttgttagatgcc
ttccagcaaggaaaagatattcatgccgctacagcggctgaaattttagggacttcactt
gatcaggtctccagcgaacagcgtcgccgtgccaaagccgtcaactttggtttgatctat
ggcatgagtgcatttggtttggcgaaacagcttggtattcctcggagcgaagcgcaatcg
tatatggagagatacttcgagcgttatcccggtgtgatgcagtacatggaagatacgcgt
gcgcaagcaagcgagcagggatatgtagaaaccctatttggccgtcgcttacatttaccg
gaaattcgctccggtaatggcatgcggagaaaagctgcggaacgtgctgcgatcaatgca
ccgatgcagggaactgccgctgatatcatcaaaaaagcgatgttattagtggatgcatgg
atcgagcaagaaggtcaggggagagtccgattgttgatgcaggtgcacgatgagctggtt
tttgaaatccaagagtcatctctgaccgaaattgaaagtaaaatacaaaaactcatggaa
tccgcagcaacacttcgtgtgcctttagttgcagaggttggacggggtgatagttgggaa
caagcccattaa
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