Vibrio gazogenes: BSQ33_08500
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Entry
BSQ33_08500 CDS
T04933
Name
(GenBank) CRISPR-associated endonuclease Cas1
Organism
vga
Vibrio gazogenes
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cas_Cas1
RVT_1
CRISPR_Cas6
AceK_regulatory
Motif
Other DBs
NCBI-ProteinID:
ASA55733
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All DBs
Position
1:complement(1879327..1882362)
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AA seq
1011 aa
AA seq
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MPREIDFKSLLPIKGIDVSLRCLSTIYCQPFHYPAMTAWLRYLLDIGEEYEKYFCIGLAE
SGKTEFHKGDYYHLRIVMIAPPDALVEYLFRQLQQLPDSLTHETYGAFGRNLTLVSIKDS
FSLKNVTQADQLLGLDEAHLTSQAEALQSTDQFIWRWDSFVRLRKKYSPDRYRPLKGDNR
FCRDCDDFSAELLMERVFTTLATLVAVHRDSERPRLGDLPKITLTECDTFWLDNYYLKHG
NTDPKSIGGASGELVFAGRLDLLWWRYIILLHWLGMGQQRIFGLGRFSLLTLEGAPLLNH
RPEPALYWSQMFHQERYLDLALEHSDGSVQEPLPDKPQLRQMVTALLNRDYEVPVLQGCI
LKKDGRAPRALAYPPLADRVLQRVVLHILQSSCEKFFDHASYGYRPAHSRQQARDEILKL
VKAGYRWVFESDIEDFFDTLDRKKLAMRLRYLFNDDCLVHYLLAWMSAPVDYQGERIERE
NGIPQGSPLSPLMANLMLDDFDNDLKLQGFKLVRFADDFVILCKNKKRAEQAQMIAEKSL
GEHGLALNPDKTHITEIDHSIQFLGYLFVNETVLDNPKRSADSDLSVPPRSWLAEYQARM
AAKAENPGDPEAEDPSDVVTDSPLVIEPLQADHTISETDDDFSISTNFSISTNVLADDPL
ADEDLMQETDDESVQLNPAEESAPAGQRDGRGTGIYISGDPCIVRTYAHRVVVQRGENIL
TDTPWTAVNHLILFGHHQMTSQAIHQACEHDIAIHHATGIGRYVGVTCAPAQNSASQRLQ
QRQLQLDETQQLQISRALVVARIRSCREILRRRSRPEHQALQQYQQQAGRAASLMQLRGY
EGMATRFYFAVLQEILPDWAGFTGRNRQPPQDPFNALLSLGYTMLYGFTDSLLRASHLLS
WAGVYHQPEGRHAALASDMMEPFRYLVERTALTLVNKKILTEADFESRDGGLWLLSQGRQ
RYLTALLQSLNAQQTAGTLSGYSIIDHIQQQITRYITSIRTGEAFEAWHSR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagaaattgatttcaaaagcttgctgccgatcaaaggaattgatgtcagtcta
cgctgcctgtccacaatatactgtcagccttttcattacccagcgatgaccgcatggttg
agatatttactcgatatcggtgaagaatatgagaagtatttttgtatcggactggcggaa
tccggtaaaaccgagtttcacaaaggggattattatcatctgagaattgtgatgattgcg
ccaccggatgctctggttgaatacctgttccggcaattgcagcaactcccagacagcctg
actcatgaaacttatggggcatttggtcgaaacctgacactggtttccatcaaagatagt
ttctcgctgaaaaatgtgacacaggcggatcaacttttgggattggatgaagctcattta
acatctcaggccgaagcgttgcagtctacggatcaatttatctggcgctgggatagcttt
gttcggttgagaaagaaatattctcctgatcgttacagaccactaaaaggtgacaatcgg
ttctgccgagactgtgatgacttttctgctgagttattaatggaaagggtgttcaccacg
ctggcgacactggtggcagtacatcgagacagtgaacgaccacggttaggtgatcttcct
aaaattacgttgactgagtgcgacaccttctggctggataattattatcttaaacacgga
aatacagatcccaaatcgattggtggtgccagtggtgagctggtgtttgccggccgttta
gatctgctttggtggcgatatatcatcctgctgcattggctggggatgggacaacagcgg
atatttggtctgggccggtttagtctgttgacacttgaaggggcgccattattaaaccat
cggccagagccggctctgtactggagtcagatgtttcatcaggagcgttatcttgatctg
gcgctagaacatagtgatggaagcgtgcaggaaccattgcccgataaaccacaactgaga
cagatggtgactgcattattaaaccgcgactatgaagtccctgtcttacaaggctgtatt
ttaaagaaggacggtcgggcccctcgggcgctcgcttatccgccactggcagatcgggtg
ttacagcgagtggtgttacacatcctgcaaagtagttgtgaaaaattctttgatcacgcc
agttatggctatcgtccggcacattcacggcaacaggcaagagatgagatccttaaattg
gtaaaagccggttatcggtgggtgtttgaatccgatattgaagattttttcgatacgctg
gatcggaaaaaactcgccatgcggttacgctatctatttaatgatgactgcttggttcat
tatctgctggcatggatgtcggcaccggtggattatcaaggggagcgaattgagcgggaa
aacggaattccacagggaagcccgctcagcccactgatggcaaacctgatgctggatgac
tttgataatgatcttaaattacaggggtttaaactggttcggtttgccgacgattttgtc
attctgtgcaagaataaaaaacgagcagaacaagctcagatgattgccgaaaaatctttg
ggtgagcatgggctggcgctgaatccggacaagacccatatcacggaaattgatcacagt
attcagtttctcggatatttgtttgtcaatgaaactgtgctggataatccgaaacgttca
gccgacagtgatctatctgttcccccccgttcatggttggcggaatatcaggcccgtatg
gccgcgaaggctgaaaatccgggtgacccagaagctgaagatccgtcggatgtcgtgact
gactcacctctggtcatcgaaccactacaagctgaccacactattagtgaaacggatgat
gatttttctatatcgacgaatttttctatatcgacaaatgtgttagcggacgacccatta
gctgatgaagatttaatgcaggagacagatgatgagagcgtgcagcttaatccggctgaa
gaatctgcaccggcagggcagcgagatggtcgggggaccggcatttatatctctggtgac
ccgtgtattgttcgtacctatgctcaccgggttgtggtgcagcgaggagaaaatattctg
acagatacgccgtggacggctgtcaatcatttgatcttatttggtcatcatcaaatgacc
agtcaggcgattcatcaggcctgtgaacacgatattgcgatccatcacgcgactggaata
ggccgctatgtgggggtgacttgcgctccggcccagaactctgccagtcagcggcttcaa
cagcgacagcttcagctcgatgaaacgcagcaattgcagatcagccgagccttagttgtg
gccagaatccgcagctgtcgggaaatattgcgccgccggagccgtccggaacatcaagcg
ttgcagcagtatcagcaacaggcggggcgtgcggccagtttaatgcaattacggggttat
gaaggaatggcaacccgattctattttgctgttcttcaggagattctaccggattgggcc
ggatttaccggacgtaatcgtcagccaccgcaggatccgtttaatgctttgttgtcgctc
ggttatacgatgttgtatggctttaccgatagcttactacgtgccagtcatctgttatcg
tgggccggtgtgtaccatcaaccggaaggccgccatgccgcactggcatcagatatgatg
gagcccttccgctatctggtcgaacggacggcactgacgttggtaaacaagaaaattctg
acggaagctgactttgaatcccgggatgggggtctctggttgttaagtcagggacgtcag
cgctatcttactgccttattgcagtcgttgaacgcacaacaaacggcaggtacgctgtcg
gggtattcgatcatcgatcatattcagcagcagattacccgttacattaccagtatccgg
accggggaggcatttgaagcatggcacagccgttaa
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