Vibrio gazogenes: BSQ33_10135
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Entry
BSQ33_10135 CDS
T04933
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vga
Vibrio gazogenes
Pathway
vga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BSQ33_10135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_10135
Enzymes [BR:
vga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSQ33_10135
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSQ33_10135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_19
WHD_PriA
AAA_30
TrwB_AAD_bind
SIR2
DUF6276
Motif
Other DBs
NCBI-ProteinID:
ASA56017
UniProt:
A0A1Z2SG05
LinkDB
All DBs
Position
1:2239673..2241877
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AA seq
734 aa
AA seq
DB search
MHPSIARVALPVPLDKQFDYLIPAHCQPVIGGRVSVPFGRQTLIGIVVALGDDSEMSPDV
LKPIRSVLDEQPIWPASLFRLFTWCSQYYQYPLGDTLSNALPAALRKGKAADFATLREWS
LTSAGRDKLMQGLGRAVQQAKVLRLLENGTQSHQVFIDEEISRQVLNTLEDKGWIEAIDR
KPDRQPWPQLLEDEDEKPQLNMEQSVAIATINSQHEFGCYLLEGVTGSGKTEVYLNLIAP
VLKQGKQALVLVPEIGLTPQTIQRFRSRFMVPVVVMHSGLNETERLNAWLSARDGHAGVI
IGTRSALFTPFSDLGIIIVDEEHDTSYKQQDSLRYHARDVAVMRANLEQIPIVLGSATPA
LETLQNALSGKYHHLTLTQRAGDAVPATNRVLDVKGLYLEGGLSAPLIAEMRKHLQVGNQ
VLLFLNRRGYAPVLMCHECGWVAHCQRCDARYTYHQVTQELRCHHCGSQRPVMHQCQDCG
STQMATVGVGTEQLETQLAALFPQYRTIRIDRDSTRRKGTLESALNAVHRGEYHILIGTQ
MLAKGHHFPRVTLVGLLDVDSALYSHDFRASERLAQLFIQVAGRAGRASQPGEVILQTHH
PEHSLLQALLKKDYRHFAMSALHERKLALLPPFSYLTLFKAESNQAELGEDFLRQVRQTL
EVHPLFDHATCTVLGPSPAPMAKRAGKYRWQLLLQTMSRPVMQKLLMSAKPVIQSLPLAG
KVRWSLDVEPHDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcatccatccattgcccgagtggcattacctgtccctttagataagcagttcgactat
ctgataccagcgcattgtcagcctgtgatcggtgggcgggtatccgtgccgtttgggcga
cagacattgattggtattgtggtcgcacttggcgatgactctgagatgagtcctgatgtg
ctgaaaccgattcgctctgtgttggatgagcagccgatctggccagccagtctatttcga
ctctttacttggtgcagtcaatattatcaatatccactcggcgataccttgtcaaatgcg
ttacccgcggcattgagaaaagggaaagccgctgattttgcgactttgcgagagtggagc
ctgacatcggccggacgagataagctgatgcaggggcttggccgtgccgttcagcaggct
aaggtgctgcgtttgctcgaaaacggtacacaaagtcatcaagtcttcatcgatgaagag
attagtcgtcaggtcttgaacacgcttgaggacaaagggtggattgaagcgattgacaga
aaaccagatcgtcaaccgtggcctcagttactggaagacgaagatgaaaagccgcaactc
aatatggaacagtccgttgcgattgcaacaatcaacagccagcacgaatttggttgctac
ttattggaaggtgtgactggctcgggaaaaacggaagtttacctgaacttgattgctccg
gtcttgaagcaaggaaagcaagctttggttctggtgcccgaaattggtttaacgccacag
acgattcagcgttttcgctcacgctttatggtgcctgtggtcgtgatgcattccgggctc
aatgaaacggaaagactcaatgcatggttgtctgcccgcgatggtcatgcgggagtgatc
attggcacacgttctgcgctgtttacaccgttttctgatttgggaatcatcattgttgat
gaagaacatgatacctcatataaacagcaagatagcttacggtatcatgcacgggatgtc
gccgttatgcgcgccaaccttgagcagattccgattgtactaggctcggcgacgcctgca
cttgagaccctacagaatgcactcagtggtaaataccaccatttaactttgacacaacgg
gctggtgatgcggttccggcaaccaatcgggttttggatgttaaaggactttatcttgaa
ggcggattgtcagcgccactgattgctgaaatgagaaagcatttacaggtcgggaatcag
gttttgctatttctcaatcggcggggatacgcccctgtgctgatgtgtcatgaatgcggc
tgggttgctcattgtcagcgctgtgatgcacgttatacctatcatcaggtcacacaggaa
cttcgctgtcaccattgtggttcccagcgtccggtcatgcatcaatgtcaggattgtggc
tcgacacagatggcaacggttggtgtcggaactgagcagttggaaacacaactggcagcg
ctcttcccccaatatcgtaccattcggattgaccgggacagcacccgaagaaaaggcacg
ctggagtcggctctcaatgccgttcatcggggggagtatcatattttaatcgggacgcag
atgctggcaaaaggccatcattttccacgcgtgacactggttggattgctggatgttgac
agtgcgttgtacagtcatgattttcgggcatcggagcgactggcacagttatttattcag
gttgcaggtcgtgccggacgcgccagccagcccggtgaagtgattcttcagacgcatcat
ccagagcatagcttacttcaggcattgcttaaaaaggattaccgtcactttgccatgagc
gcgttacatgagcggaaactggcattgttacctccttttagttacttgactttatttaag
gccgagtcaaatcaagctgagcttggggaagattttctcagacaggtcaggcagacgttg
gaggttcatccgttgtttgatcatgcaacctgtacggtcttagggccatctccggcaccc
atggcgaaacgagctgggaaatatcgttggcagttattgcttcaaacgatgagtcggccg
gtgatgcaaaaactgttgatgagtgctaaacctgttattcaaagtttaccactcgcaggg
aaagttcgttggtcgctcgatgttgaaccacatgatctgtcataa
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