Vibrio gazogenes: BSQ33_10705
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Entry
BSQ33_10705 CDS
T04933
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vga
Vibrio gazogenes
Pathway
vga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSQ33_10705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vga03021
]
BSQ33_10705
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_10705
Enzymes [BR:
vga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSQ33_10705
Transcription machinery [BR:
vga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSQ33_10705
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSQ33_10705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ASA56123
UniProt:
A0A1Z2SG11
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All DBs
Position
1:2347824..2348816
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AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIVNPEHVICHLNDDNAEVAMRIKVQRGRGYVPASARIHTDEDDRPIGRLLVDATYSP
VDKIAYTVEAARVEQRTDLDKLVIDMETNGTIEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtcttgttgatatcgaacaaatcagc
acgacacacgcaaaagtaactcttgagccgttagagcgtggtttcggccatactctgggt
aatgcacttcgccgaattcttctttcgtctatgccaggttgtgccgtgactgaagttgaa
attgaaggcgtactacacgagtacagcaccaaagaaggtgttcaagaggatatcctagaa
atccttctgaacctgaagggtttagctgttcgcgttgccgaaggcaaagatgaagtgttc
attacactaaacaaatcaggctcgggccctgttgttgcaggtgacatcactcatgatggt
gatgttgagatcgtaaaccctgagcacgttatttgtcatcttaacgatgacaatgctgag
gtcgcaatgcgcatcaaggttcaacgtggtcgtggttatgttccggcttctgctcgtatc
catacagatgaagatgatcgtccgattggtcgcctacttgttgatgctacttacagcccg
gtggataaaatcgcctatactgtagaagcagcacgtgtagaacagcgtactgatttagac
aagcttgtcatcgatatggaaacaaatggcacaattgaacctgaggaagctatccgtcgt
gcagcaacaattcttgctgaacagttggatgcattcgtagatctacgtgatgtacgagtt
cctgaggagaaagaagagaagcctgaattcgatccgatcctattgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtttgaaagcagaagcgattcactacatcggt
gatctagtacagcgtactgaggtagaattacttaaaacacctaacctcggtaagaaatct
ttaacagagattaaagacgtgcttgcatcacgtggtctttctctgggtatgcgcctagaa
aactggccgccagcatctatcgctgaagattaa
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