Vibrio gazogenes: BSQ33_13570
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Entry
BSQ33_13570 CDS
T04933
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vga
Vibrio gazogenes
Pathway
vga00260
Glycine, serine and threonine metabolism
vga00460
Cyanoamino acid metabolism
vga00630
Glyoxylate and dicarboxylate metabolism
vga00670
One carbon pool by folate
vga00680
Methane metabolism
vga01100
Metabolic pathways
vga01110
Biosynthesis of secondary metabolites
vga01120
Microbial metabolism in diverse environments
vga01200
Carbon metabolism
vga01230
Biosynthesis of amino acids
vga01240
Biosynthesis of cofactors
vga04981
Folate transport and metabolism
Module
vga_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BSQ33_13570 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BSQ33_13570 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BSQ33_13570 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BSQ33_13570 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BSQ33_13570 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BSQ33_13570 (glyA)
Enzymes [BR:
vga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BSQ33_13570 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ASA56615
UniProt:
A0A1Z2SHK9
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All DBs
Position
1:2953687..2954937
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDADLFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
SKRYYGGCEYVDKVETLAIERACQLFNCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYHVIPYGIDESGQINYEEMESLAVEHKPKMIIGGFSAYSQI
VDWARMREIADKVGAYLFVDMAHVAGLVAAGAYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKAYQERVVQNAKAMVAQ
FQARGYKIVSNSTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTVDDAKELAGWMCDVLDNINDSSVIDATKAKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaatatcgctgattatgatgcggatcttttcgcagccattcaa
gaagaaactcttcgtcaggaagagcacattgaacttattgcttcagaaaattataccagt
ccacgcgtcatggaagctcagggttctcaactgaccaataaatatgcagaaggctatccg
agcaagcgttattatggtggttgcgagtatgtcgataaagttgaaacattagcgattgaa
cgtgcatgccaattgtttaactgtgaatacgcaaacgtccagcctcactccggttctcag
gcgaacagtgctgtatatatggcattattgaatcccggtgatacggttttagggatgagc
ctggctcacggtggtcacttaacgcacggttcaccggttaacttctccggtaaacattat
catgtgattccttatggcattgatgaaagtggtcagattaactacgaagaaatggaatcg
ctggccgttgaacataagccgaaaatgattatcggtggtttttctgcttattcacagatt
gttgattgggctcggatgcgtgaaatcgctgataaagtcggtgcttacctgtttgttgat
atggctcatgtggcaggtctggttgctgctggtgcttatccaacgccggttcctcacgct
cacgttgtcacaaccacaacacataaaacattagcgggccctcgtggtggtttgattctg
tcaaacgctggtgaagatatgtacaaaaaactgaactctgctgtattccccggtggtcag
ggtggtcctctgatgcatgtgattgcagcaaaagcggttgcgttcaaagaagcaatggaa
cctgaatttaaagcgtatcaggaacgtgttgtgcaaaatgcaaaagcgatggttgctcag
tttcaagctcgcggctataagattgtctcaaatagtaccgaaaaccaccttttcttagtt
gatttgatcgacaaagatattacgggtaaagacgcagatgcagcgctcggtgcagcaaat
attacagtgaataagaactctgtaccaaatgacccgcgtagcccatttgtgacatctggc
attcgtgtcggcacaccagcgattacccgacgtggctttactgtcgatgatgcgaaagag
ttggcaggctggatgtgtgatgtgttggataacatcaatgattcaagtgtgattgatgcg
accaaagcaaaagtgcttgaaatttgtaagcgtctccctgtttacgcataa
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