Vibrio gazogenes: BSQ33_14850
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Entry
BSQ33_14850 CDS
T04933
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vga
Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vga03032
]
BSQ33_14850
03036 Chromosome and associated proteins [BR:
vga03036
]
BSQ33_14850
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_14850
DNA replication proteins [BR:
vga03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BSQ33_14850
Chromosome and associated proteins [BR:
vga03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BSQ33_14850
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BSQ33_14850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
Coagulin
HU-CCDC81_euk_1
HU-CCDC81_bac_1
Glycos_trans_3N
Ybfg_C
Motif
Other DBs
NCBI-ProteinID:
ASA56845
UniProt:
A0A1Z2SI98
LinkDB
All DBs
Position
1:3247608..3247892
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AA seq
94 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKDIIEHMATSLEQGDRIEIRGFGSFSLHYREPRT
GRNPKTGEKVELDGKYVPHFKPGKELRERVNSTI
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtctgaattgattgaaagattgtgcgcagagcaaactcatctgtccgcgaaa
gaaatcgaagatgccgtaaaagatatcatcgaacatatggcgacatcgttggaacaggga
gacagaatagagattcgaggctttggcagtttctctctgcattatcgtgagcctcgcact
ggacgtaacccaaaaacaggtgaaaaagttgaattggatggtaaatatgtccctcacttt
aaacctggcaaagaactcagagagcgcgttaatagtacgatctga
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integrated database retrieval system
