Vibrio gazogenes: BSQ33_16475
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Entry
BSQ33_16475 CDS
T04933
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vga
Vibrio gazogenes
Pathway
vga03030
DNA replication
vga03430
Mismatch repair
vga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSQ33_16475
03430 Mismatch repair
BSQ33_16475
03440 Homologous recombination
BSQ33_16475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vga03032
]
BSQ33_16475
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_16475
Enzymes [BR:
vga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSQ33_16475
DNA replication proteins [BR:
vga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSQ33_16475
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSQ33_16475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ASA58258
UniProt:
A0A1Z2SM16
LinkDB
All DBs
Position
2:complement(154286..154996)
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AA seq
236 aa
AA seq
DB search
MLTDWLQHWKYPSDAEALRQRIQIAPHWSAALQAYLSHPFAQPETPLGELRFLALDFETT
GLAPAHDQILSIGMVDLTLEAIDIASHEELLINHGKFIKPETAQINGLTPHALAQGISLA
DGMNRLLERAQGKILLAHHCQIEKCFIATFFRHHAQLQSFPACFVDTLDIEKRFSYAGKS
RQHDSYQLDDLRRFYHLPDYCSHSAASDALACGELFLVQIKKLNLQKTPIRQLLTR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgctcactgactggctgcaacactggaaatatccatccgacgcagaggcgctacggcaa
cggattcaaatcgcccctcattggtcagcggcattacaggcatatttgtcacatcccttt
gctcagccagaaacaccactcggtgagctccggtttctggcgcttgatttcgaaacgaca
ggtctggcacctgcacatgatcaaatcctctcgattgggatggttgatttaactttagaa
gccattgatatcgccagtcatgaagaactgttgatcaaccatggcaagttcatcaaacca
gagaccgcacaaatcaacgggctgacgccgcatgccttggcgcaaggtatctctctggcc
gatgggatgaatcggctgttggaacgggcacaggggaaaatattactggcgcatcattgc
cagatagaaaaatgttttatcgcaacctttttccgacatcatgcgcaattgcaatcgttt
cctgcctgtttcgtcgatactctcgatatcgaaaaacgattcagttacgcagggaaaagc
agacaacacgacagctatcagttggatgacttacgccgtttctaccatctgcccgattac
tgttcacattcggcagccagcgatgctctcgcctgtggcgaactctttttagttcagatt
aaaaaactgaacttacaaaaaacccctatcaggcaattactgacccgatag
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