KEGG   Vibrio gazogenes: BSQ33_16845
Entry
BSQ33_16845       CDS       T04933                                 
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
vga  Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:vga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vga03400]
    BSQ33_16845
Enzymes [BR:vga01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BSQ33_16845
DNA repair and recombination proteins [BR:vga03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BSQ33_16845
SSDB
Motif
Pfam: UvrD-helicase Helicase_IV_N AAA_19 UvrD_C UvrD_C_2 Viral_helicase1 AAA_12 AAA_30
Other DBs
NCBI-ProteinID: ASA57433
UniProt: A0A1Z2SJS1
LinkDB
Position
2:246539..248605
AA seq 688 aa
MQLKASNTAKYFMNDEFYAVAIDDEKLIVRSRVAEERIPFAVWDGSVRVRRGIVWGELEF
FAHEHDGQRYSWLIRGLPWPQCRKFADQAVAAYRQWHQSQCAQLATYLPAWQQALSQRQN
EPAFLAHSKIREWHRQVSRDLTTLGMSLDDIEQRVPGLISEIVAWYHQPSVMLSQRNETW
IETERERWDTLFNTLESSPLNPSQQSAVLLNDDYNLVLAGAGSGKTSVLSARVAYLIESG
LAKADQILLLSFGKDAALEMEQRLKDRVGPAAQHVTVNTFHQLGLRIIHEVEGQDVQLSP
IVGEAKLKEAWMTDWLKKHWMTPTNFKRWQKHLNQWPIAYIKGDEELGSHVENPKLISWL
TQQVEQLSLLGASKKEIQQKIVEREDYPRLNSELALCWPCYQAWNEMLKTQGQLDFNLMI
SRATAYVRKKKYQSRWAFIMVDEYQDISPPRLALLEALCKQHQSNGNLFAVGDDWQSIYQ
FAGSDVDLTTGFKQRFPASTVTHLDTTYRFNNRLAEVANTFVQANPQQIPKSLNSLKVQK
SNAVALLPQARIEKVIEQLNRKSTAKNEVKSLLILGRNHYHKPELLAAWQKQYQQLDIQF
MTCHASKGKEADFVIIVNVDEGQFPTKAKTLHLDDVLTLSNETFPHAEERRLFYVAMTRA
REKVWVAYNAGGSTFVKELLEGPYAVSK
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgcagctgaaagccagtaatactgcgaaatattttatgaatgatgagttttacgccgtc
gcaattgatgacgagaaactcatcgtccgttcccgtgttgcagaagaaagaattccattc
gcagtttgggatggttcagtccgtgtccggcgcggcattgtgtggggagaacttgagttt
tttgcccatgagcatgatggccaacgttatagttggctcattcgtggattaccttggccc
cagtgccgaaagtttgctgaccaagctgtggctgcctatcgtcaatggcaccaatcacag
tgcgctcagttggctacttacttaccagcttggcagcaggctttgagtcagcgccagaat
gagcctgcttttctcgctcattctaagatcagagaatggcatcgtcaggtgagccgagat
ttgacaacattgggcatgtctctcgatgacattgaacaacgggttccggggctaatttca
gagattgttgcatggtaccatcaaccttcagtgatgttgtcacagcgtaacgaaacatgg
attgagacagagcgtgagcgctgggatacgttatttaacacactggaatcctctccctta
aatccatcgcagcagtccgcggtacttttgaatgatgattacaatctggtgctcgctggt
gccggctcgggaaaaaccagcgtgctttctgcccgggttgcttatctgattgaaagtggg
ctggcaaaagccgatcaaattctattgctttcattcggtaaagatgccgcattggagatg
gaacagcgattgaaagatcgggtagggccggcagcgcagcatgtcacagtgaatacattt
catcagcttggattacggattattcatgaggtggaagggcaagacgtacaactctccccg
atcgtgggcgaagcgaagctcaaagaagcctggatgaccgattggctcaaaaagcattgg
atgacaccaacaaactttaaacggtggcaaaaacacttaaatcaatggccgattgcttat
atcaaaggggatgaagagctgggaagccatgttgaaaatcctaagttgatctcttggttg
actcagcaagtcgaacaactgtcgctgttgggggcgagtaaaaaagagattcagcaaaaa
atcgtcgagcgggaagattatccgcgtctgaacagtgagcttgcattatgctggccatgt
tatcaggcatggaatgaaatgcttaagactcagggacaactcgattttaatctgatgatc
agtcgagcaactgcatatgtcagaaagaaaaagtatcaatcccgttgggcgtttattatg
gtcgatgaatatcaggatatttcaccgccgcgtcttgcgttactggaggcgctttgtaaa
caacatcaatcaaacgggaatctctttgccgtcggtgatgactggcaatcaatttaccag
tttgccggttccgatgttgatttaacaacgggtttcaagcaacggtttcccgcatcgaca
gtgacgcatctcgataccacttatcggtttaataaccggttggctgaggtggcaaatact
ttcgtgcaggctaatcctcagcagataccgaagtcactcaatagcctgaaagtacaaaag
agcaatgcggtggcactgttgccccaagctcggattgaaaaggttattgaacaactgaat
cgcaagagtacagccaaaaatgaagtcaagtcactattaatccttggccgaaatcactat
cacaaaccggaattactggcagcatggcaaaagcaataccaacagcttgatattcagttc
atgacctgtcatgccagtaaggggaaagaagccgattttgtgatcattgtgaatgtggat
gaagggcagtttccaaccaaagcgaaaaccttgcatttagatgatgtattaacattatca
aatgagacctttccgcatgcagaagaacgtcggttgttttatgttgcgatgacccgggca
agagaaaaagtctgggttgcctacaatgcaggcggttccaccttcgtcaaagagcttctt
gaggggccatacgcggtttctaaatga

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