Vibrio gazogenes: BSQ33_18320
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Entry
BSQ33_18320 CDS
T04933
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vga
Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_18320
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSQ33_18320
Archaeal homologous recombinant proteins
BSQ33_18320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_16
ABC_tran
DUF6494
Motif
Other DBs
NCBI-ProteinID:
ASA57701
UniProt:
A0A1Z2SKH7
LinkDB
All DBs
Position
2:591810..594848
Genome browser
AA seq
1012 aa
AA seq
DB search
MTPLKLTMQAFGPFAHTEQIDFTQLGRHPLFLINGPTGSGKTSILDAICFALYGETTGNE
RQGNQMRSDLASIDTPTEITLTFALHDKVYRVTRSPEQQVPKSRGEGTTVRKHSAALYDI
TNEEKLITAKTTQVKTDVTALIGLNDTQFRQVMVLPQGQFRELLLASSKDREAIFGQLFQ
TDIYKKIEFALKDKASDITQAKNEFDNQIRGALQVAGVTSEQELDEQQTELARQLEAARH
QEQNALSALNQAKSEIHKAQTLNQDFDRFSQAQSALNTHLEQSALMAAKQQQLDTARNAA
KIQLPYVNRINAAKQTDEFQQKISAQEKARTTAQTEQQRKQATLDHATEQAKQIPELTKT
VYQLESLKTKLTEKQALEAKIAEYINQKQKLETTQTQYLTHKEKLVREAEQARQALETAQ
TEVAEKPVIEADIARMQRLATDLNQLDTLRKQHQQALEQTPQKTAAVKQAQQDFTAAQQQ
ADRLEMQWHSAQAAILAQKLQSGEACPVCGSCDHPSPALLTETEVTKAHIQQARAEQQQA
WQHYHQCSAQLDQHQTLISQTEQRLNEFTTQLGEQASIQPAQLQQDLQAKHDRLQYLSTL
NLEQMAQAVTTLNQRCEAGEHKLTELQQQMVVNDSQLSTSQEQLRQLSESIDPKCDSVTK
VDQEIAATQQQIDTLNQTFTTAQTELQQATLAYANLNSQITTNQELLQQAKTRLTTAEAE
WHQALAASHFNDEQHYLDSQRTEQEIQRWQQDLDAFKQTQTRLEQTLADLTTTLKDAQRP
DLAALDATLTQSQQIYSDARQQLDATYSTFERLEKVRQDMTQLHAKNAKLEQEYQVYGTL
YDVARGNTGSRVSLHRFVLGVLLDDVLIQASQRLSLMSKGRYTLVRKTEGFKGIAGRGLD
LMVEDGYTGKNRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLETLFIDEGFGSLDP
ESLDLAIQTLVDLQQTGRMIGIISHVAGLKEQMALRIDVEPSLTGSTVKVHH
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgacaccattaaaactgacaatgcaggcctttggcccttttgcgcatacagaacagatt
gattttacgcagttggggcgtcatccgctgtttctgattaatggcccgaccggctcagga
aagacttcgattctggatgcgatctgctttgcactgtatggcgaaaccactggcaatgaa
cgtcagggcaaccaaatgcgcagtgatctcgcgagtatagacaccccgactgaaatcacc
ctgacttttgcgctgcatgataaagtctatcgagtcacccgcagcccggaacaacaagtg
cctaaaagccgtggtgaaggcaccaccgttcgcaaacacagcgcagcgctgtacgacatc
acgaacgaagaaaaactcatcaccgccaaaaccacacaggtcaaaaccgatgtgacggct
ttgatcggcctcaacgacacccagtttcgtcaggtcatggtgctgccacaaggtcagttc
cgcgagctattactggccagctctaaagatcgggaagccattttcggccaactgtttcaa
accgatatctacaagaaaatcgagtttgcactcaaagataaggccagcgatatcactcag
gctaaaaacgaattcgataatcagattcgcggcgcattacaagttgcaggcgtcacttca
gagcaggaactggacgaacagcagaccgagcttgcccgacaactcgaagcggcgcgtcat
caagagcagaacgccttgtcggcactcaatcaggctaaatccgagatccacaaggcccag
acgctcaatcaggattttgaccgattcagccaggcacaatccgctctgaacacgcacctt
gaacaaagtgcgctcatggcagccaagcaacaacaacttgataccgcgcgcaatgcggcc
aaaatccagctaccttatgtcaatcgaatcaatgccgccaagcagactgacgagtttcag
cagaaaatcagcgctcaggagaaggctcgcaccaccgcacagacggaacaacagcgtaaa
caagccacactcgatcacgcgacggaacaagccaagcagatccctgaactgaccaagacg
gtctatcagttagaaagcctcaaaaccaaattgactgaaaagcaggcactcgaagcaaaa
atcgcggaatatatcaaccagaaacagaagcttgagaccactcagacccaatatcttacc
cataaagaaaaattggtccgcgaagccgagcaagcccgccaagcattggagacagcgcaa
actgaagtggctgaaaagccagtgattgaagctgatattgcccggatgcagcgtttagcc
acggatctcaatcaactggacaccctcagaaaacagcatcagcaagcactcgaacagacg
ccgcaaaagacggctgcggtcaaacaggcacagcaagattttactgcggcgcagcaacaa
gccgatcggctagaaatgcagtggcacagtgcgcaagcagccattcttgctcagaaactt
cagtccggagaggcgtgtccggtctgcggcagttgtgatcatccgtcccccgcactgttg
accgagactgaagtgaccaaagcacacatccagcaagcccgcgctgaacagcaacaggca
tggcaacactatcatcaatgctcagcacaactggaccaacaccagacactcattagccag
accgaacaacgtctgaatgagttcaccacacaactcggtgaacaagcctcgattcaaccg
gcacaactccagcaagatttacaggccaaacatgaccgcctgcaatatttatccaccctc
aatctggaacagatggcgcaagccgtcacaacactcaatcaacgctgcgaagccggagaa
cacaaactgaccgaactccagcagcaaatggtggtcaacgattcacagttgagtaccagt
caggaacaactgcgccagctcagtgaatccatcgaccctaaatgtgacagcgtcactaaa
gtcgatcaggaaattgcggcaacccagcagcaaatcgatacgctcaaccaaacattcacg
accgcacagactgagctgcaacaagcaacgctggcctatgcgaaccttaacagccagatc
acaaccaatcaggagttactgcaacaggccaaaacacgcctgaccacagcagaagctgaa
tggcaccaagcgttggctgcaagccatttcaacgatgaacaacactacctcgacagtcaa
cgcaccgagcaggagattcagcgctggcaacaagatctggatgcgttcaaacagacacaa
acccgcttggaacagacactggctgacttaacgacaactttaaaagatgcccaaagaccg
gatttagcagcactggacgcgaccctgacgcagagccaacaaatctatagcgacgctcgc
cagcaacttgacgccacctattcaaccttcgaacggttggagaaagtgcgtcaggatatg
actcagttacatgcgaaaaatgccaaactggaacaagaatatcaggtctacggcaccctc
tatgatgttgccagaggtaacacggggagccgggtcagcctgcaccgctttgtgctgggg
gtattacttgatgacgtcctgatccaagcctctcagcggctgagtttaatgagcaaaggt
cgctatacgctggtgcggaaaacggaggggttcaaaggcattgccggtcgggggctcgat
ttgatggtggaagatggttacaccggtaaaaaccgcgatgtggcaacactgtccggcggg
gagtcatttatggctgcgctggcgctcgctttgggcttgtctgatgtggtgcagtcctac
agtggtggcatccgactggaaacattattcattgatgagggttttggtagcttagatccg
gagtcgctcgatctggcgatccagacattggtagacctccaacaaaccgggcggatgatc
ggcatcatctcccacgtcgcgggtctgaaagagcaaatggcgctacggattgacgtcgaa
ccttcactgaccggatcaaccgtcaaagtgcatcattaa
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