KEGG   Vibrio gazogenes: BSQ33_18320
Entry
BSQ33_18320       CDS       T04933                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
vga  Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:vga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vga03400]
    BSQ33_18320
DNA repair and recombination proteins [BR:vga03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BSQ33_18320
    Archaeal homologous recombinant proteins
     BSQ33_18320
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 AAA_21 AAA_16 ABC_tran DUF6494
Other DBs
NCBI-ProteinID: ASA57701
UniProt: A0A1Z2SKH7
LinkDB
Position
2:591810..594848
AA seq 1012 aa
MTPLKLTMQAFGPFAHTEQIDFTQLGRHPLFLINGPTGSGKTSILDAICFALYGETTGNE
RQGNQMRSDLASIDTPTEITLTFALHDKVYRVTRSPEQQVPKSRGEGTTVRKHSAALYDI
TNEEKLITAKTTQVKTDVTALIGLNDTQFRQVMVLPQGQFRELLLASSKDREAIFGQLFQ
TDIYKKIEFALKDKASDITQAKNEFDNQIRGALQVAGVTSEQELDEQQTELARQLEAARH
QEQNALSALNQAKSEIHKAQTLNQDFDRFSQAQSALNTHLEQSALMAAKQQQLDTARNAA
KIQLPYVNRINAAKQTDEFQQKISAQEKARTTAQTEQQRKQATLDHATEQAKQIPELTKT
VYQLESLKTKLTEKQALEAKIAEYINQKQKLETTQTQYLTHKEKLVREAEQARQALETAQ
TEVAEKPVIEADIARMQRLATDLNQLDTLRKQHQQALEQTPQKTAAVKQAQQDFTAAQQQ
ADRLEMQWHSAQAAILAQKLQSGEACPVCGSCDHPSPALLTETEVTKAHIQQARAEQQQA
WQHYHQCSAQLDQHQTLISQTEQRLNEFTTQLGEQASIQPAQLQQDLQAKHDRLQYLSTL
NLEQMAQAVTTLNQRCEAGEHKLTELQQQMVVNDSQLSTSQEQLRQLSESIDPKCDSVTK
VDQEIAATQQQIDTLNQTFTTAQTELQQATLAYANLNSQITTNQELLQQAKTRLTTAEAE
WHQALAASHFNDEQHYLDSQRTEQEIQRWQQDLDAFKQTQTRLEQTLADLTTTLKDAQRP
DLAALDATLTQSQQIYSDARQQLDATYSTFERLEKVRQDMTQLHAKNAKLEQEYQVYGTL
YDVARGNTGSRVSLHRFVLGVLLDDVLIQASQRLSLMSKGRYTLVRKTEGFKGIAGRGLD
LMVEDGYTGKNRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLETLFIDEGFGSLDP
ESLDLAIQTLVDLQQTGRMIGIISHVAGLKEQMALRIDVEPSLTGSTVKVHH
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgacaccattaaaactgacaatgcaggcctttggcccttttgcgcatacagaacagatt
gattttacgcagttggggcgtcatccgctgtttctgattaatggcccgaccggctcagga
aagacttcgattctggatgcgatctgctttgcactgtatggcgaaaccactggcaatgaa
cgtcagggcaaccaaatgcgcagtgatctcgcgagtatagacaccccgactgaaatcacc
ctgacttttgcgctgcatgataaagtctatcgagtcacccgcagcccggaacaacaagtg
cctaaaagccgtggtgaaggcaccaccgttcgcaaacacagcgcagcgctgtacgacatc
acgaacgaagaaaaactcatcaccgccaaaaccacacaggtcaaaaccgatgtgacggct
ttgatcggcctcaacgacacccagtttcgtcaggtcatggtgctgccacaaggtcagttc
cgcgagctattactggccagctctaaagatcgggaagccattttcggccaactgtttcaa
accgatatctacaagaaaatcgagtttgcactcaaagataaggccagcgatatcactcag
gctaaaaacgaattcgataatcagattcgcggcgcattacaagttgcaggcgtcacttca
gagcaggaactggacgaacagcagaccgagcttgcccgacaactcgaagcggcgcgtcat
caagagcagaacgccttgtcggcactcaatcaggctaaatccgagatccacaaggcccag
acgctcaatcaggattttgaccgattcagccaggcacaatccgctctgaacacgcacctt
gaacaaagtgcgctcatggcagccaagcaacaacaacttgataccgcgcgcaatgcggcc
aaaatccagctaccttatgtcaatcgaatcaatgccgccaagcagactgacgagtttcag
cagaaaatcagcgctcaggagaaggctcgcaccaccgcacagacggaacaacagcgtaaa
caagccacactcgatcacgcgacggaacaagccaagcagatccctgaactgaccaagacg
gtctatcagttagaaagcctcaaaaccaaattgactgaaaagcaggcactcgaagcaaaa
atcgcggaatatatcaaccagaaacagaagcttgagaccactcagacccaatatcttacc
cataaagaaaaattggtccgcgaagccgagcaagcccgccaagcattggagacagcgcaa
actgaagtggctgaaaagccagtgattgaagctgatattgcccggatgcagcgtttagcc
acggatctcaatcaactggacaccctcagaaaacagcatcagcaagcactcgaacagacg
ccgcaaaagacggctgcggtcaaacaggcacagcaagattttactgcggcgcagcaacaa
gccgatcggctagaaatgcagtggcacagtgcgcaagcagccattcttgctcagaaactt
cagtccggagaggcgtgtccggtctgcggcagttgtgatcatccgtcccccgcactgttg
accgagactgaagtgaccaaagcacacatccagcaagcccgcgctgaacagcaacaggca
tggcaacactatcatcaatgctcagcacaactggaccaacaccagacactcattagccag
accgaacaacgtctgaatgagttcaccacacaactcggtgaacaagcctcgattcaaccg
gcacaactccagcaagatttacaggccaaacatgaccgcctgcaatatttatccaccctc
aatctggaacagatggcgcaagccgtcacaacactcaatcaacgctgcgaagccggagaa
cacaaactgaccgaactccagcagcaaatggtggtcaacgattcacagttgagtaccagt
caggaacaactgcgccagctcagtgaatccatcgaccctaaatgtgacagcgtcactaaa
gtcgatcaggaaattgcggcaacccagcagcaaatcgatacgctcaaccaaacattcacg
accgcacagactgagctgcaacaagcaacgctggcctatgcgaaccttaacagccagatc
acaaccaatcaggagttactgcaacaggccaaaacacgcctgaccacagcagaagctgaa
tggcaccaagcgttggctgcaagccatttcaacgatgaacaacactacctcgacagtcaa
cgcaccgagcaggagattcagcgctggcaacaagatctggatgcgttcaaacagacacaa
acccgcttggaacagacactggctgacttaacgacaactttaaaagatgcccaaagaccg
gatttagcagcactggacgcgaccctgacgcagagccaacaaatctatagcgacgctcgc
cagcaacttgacgccacctattcaaccttcgaacggttggagaaagtgcgtcaggatatg
actcagttacatgcgaaaaatgccaaactggaacaagaatatcaggtctacggcaccctc
tatgatgttgccagaggtaacacggggagccgggtcagcctgcaccgctttgtgctgggg
gtattacttgatgacgtcctgatccaagcctctcagcggctgagtttaatgagcaaaggt
cgctatacgctggtgcggaaaacggaggggttcaaaggcattgccggtcgggggctcgat
ttgatggtggaagatggttacaccggtaaaaaccgcgatgtggcaacactgtccggcggg
gagtcatttatggctgcgctggcgctcgctttgggcttgtctgatgtggtgcagtcctac
agtggtggcatccgactggaaacattattcattgatgagggttttggtagcttagatccg
gagtcgctcgatctggcgatccagacattggtagacctccaacaaaccgggcggatgatc
ggcatcatctcccacgtcgcgggtctgaaagagcaaatggcgctacggattgacgtcgaa
ccttcactgaccggatcaaccgtcaaagtgcatcattaa

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