Vibrio gazogenes: BSQ33_21445
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Entry
BSQ33_21445 CDS
T04933
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vga
Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_21445
Enzymes [BR:
vga01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BSQ33_21445
DNA repair and recombination proteins [BR:
vga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BSQ33_21445
Prokaryotic type
BSQ33_21445
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASA58242
UniProt:
A0A1Z2SM36
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All DBs
Position
2:1300204..1301625
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AA seq
473 aa
AA seq
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MKLVWFRRDLRTIDHTALNEAIRSGEPVCAIFVATPEQWRQHDMAPIQADLIARRLPVIR
DELRQLNVPLYYREVSDFAASVEMVVALARQLGADTVLVNLEYELNEQRRDQQLKQSLQQ
QGIAYQAYHDKCVFSPGQVLTKQGEFFKVFTPFRKAWQAQFIVPTVVAPSPAASAPLHHE
PMLKNVGEYFSYPRESSHAWPVTSHEIRDRLRTFCRERVDAYDQQRDFPALSATSGLSPY
LAIGALSVRQCLARLYQSSEHGRLSAGAESWLSELIWREFYQHLIYFQPSLCQGKSFHPW
GEQLHWHDASQALVRWQQGMTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTKDLHIDWR
EGERYFMSRLIDGDFAANNGGWQWSASTGCDGQPYFRIFNPVSQGKKFDPDGTFVRDWVP
ELESVSNKWIHEPWRDPSVNYLSYPQPIVDHQVERKLTLSLYQKAKDNCCHDS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggtttggttcagacgtgatttgagaacaattgatcacaccgcactgaatgag
gcaattcgcagtggtgagccggtttgtgccatctttgttgccacaccggagcagtggcga
caacatgatatggcaccgatacaggctgatttgatagcacggcgtttgccggtgattcgt
gatgagctgcgacaattgaatgtgcctttatactatcgggaagtgagtgattttgctgcg
agtgtcgagatggttgtcgcgctggcccggcaactgggggcggatacggtgttggtcaat
cttgaatatgaactcaatgagcagcggcgcgatcagcaactcaaacagagcttacaacaa
cagggaattgcttatcaggcataccatgataaatgtgtgttctcacccggacaggtttta
accaagcaaggggagttttttaaagttttcacgccctttcgtaaagcttggcaggcacag
ttcatcgttccaacggtggtcgcgccatcaccggccgccagtgcgccattacatcatgaa
ccgatgctaaaaaacgttggtgagtatttttcttatccgcgtgagtccagccatgcatgg
ccggtgacatcccatgaaattcgcgatcggctccggactttttgtcgcgagcgggtcgat
gcttatgatcagcagcgtgattttccagcattgagtgcgaccagtggattatctccgtat
ctggctattggagcgctatcggtacgccagtgtctggcaaggttgtatcaatcatcagaa
catgggcgtttatccgcaggggccgagtcttggttaagtgaactgatctggcgggaattt
taccaacatttaatctattttcagccctcattgtgccaaggtaaaagcttccacccttgg
ggagagcaattgcactggcatgatgcttcacaagcattggttcgttggcaacagggcatg
acgggttacccgctcgttgatgcagcaatgcgacagttgaatcagaccggatggatgcat
aatcgtctgagaatggtggttgcgagctttctgactaaagacctacacattgactggcgg
gaaggagagcgttacttcatgagccggttgattgacggtgattttgcagccaacaacggt
ggctggcagtggtctgcatcgaccggatgtgatggccagccttattttcggatttttaat
ccggtttctcaggggaaaaaatttgatccggacgggacgtttgtgcgcgactgggtgccg
gagcttgagtcggtgtcaaacaaatggattcatgagccttggcgtgatccatctgtgaat
tatctgtcatatcctcagccaatcgttgatcatcaggttgaaagaaagctaaccttgtct
ctttatcagaaagcaaaggataactgctgccatgattcgtaa
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