KEGG   Vibrio gigantis: MID13_00170
Entry
MID13_00170       CDS       T08202                                 
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
  KO
K01825  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
vgi  Vibrio gigantis
Pathway
vgi00071  Fatty acid degradation
vgi00280  Valine, leucine and isoleucine degradation
vgi00310  Lysine degradation
vgi00362  Benzoate degradation
vgi00380  Tryptophan metabolism
vgi00410  beta-Alanine metabolism
vgi00640  Propanoate metabolism
vgi00650  Butanoate metabolism
vgi00907  Pinene, camphor and geraniol degradation
vgi00930  Caprolactam degradation
vgi01100  Metabolic pathways
vgi01110  Biosynthesis of secondary metabolites
vgi01120  Microbial metabolism in diverse environments
vgi01200  Carbon metabolism
vgi01212  Fatty acid metabolism
Module
vgi_M00087  beta-Oxidation
Brite
KEGG Orthology (KO) [BR:vgi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00640 Propanoate metabolism
    MID13_00170 (fadB)
   00650 Butanoate metabolism
    MID13_00170 (fadB)
  09103 Lipid metabolism
   00071 Fatty acid degradation
    MID13_00170 (fadB)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    MID13_00170 (fadB)
   00310 Lysine degradation
    MID13_00170 (fadB)
   00380 Tryptophan metabolism
    MID13_00170 (fadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    MID13_00170 (fadB)
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    MID13_00170 (fadB)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    MID13_00170 (fadB)
   00930 Caprolactam degradation
    MID13_00170 (fadB)
Enzymes [BR:vgi01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     MID13_00170 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     MID13_00170 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     MID13_00170 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase
     MID13_00170 (fadB)
SSDB
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 DUF5546
Other DBs
NCBI-ProteinID: ULN64304
LinkDB
Position
1:complement(34303..36474)
AA seq 723 aa
MIYQANTLQVKELQDGIAELSFCAPASVNKLDLATLESLDKALDALNAHAGLRGLILTSN
KDAFIVGADITEFLGLFAKPEAELDEWLRFANSIFSKLEDLPVPTLSMMRGHALGGGCEC
VLATDFRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
VGLLDAIVETDQLLESAINTVSLAANEKLDWQLRRKQKTSALSLSKLEAMMSFTMAKGLV
AQKAGPHYPAPITSVIAIEEAARSDRDAALDIERKHFVKLAKSEEAKALVGLFLNDQYIK
GLAKQAGKSANKATERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLDLGMNEASKL
LNKRLSRGRLDGFKMAGILSSITPSLHYAGVEQSDVIVEAVVENPKVKAAVLSEVEGLVG
EDTVLTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGLDTAHHAQAVMAQGFPERMGKEGRDAIDALYVAEKYGQKNGSGFYTYSVDKRGR
PKKTFSEDILPILADVCQQPQDFDDQTIIQRVMIPMINEVVLCLEEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIGNFVEMAKGYQDLGAMYQVPQLLLDMAAKGESFYDSQQA
SSL
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgatttaccaagctaacaccctacaggtaaaggaattacaagatggtattgcggaatta
agcttctgtgcaccagcctctgtaaacaaactcgaccttgctactttagaatcactagac
aaagcgttagatgctctcaatgctcacgcaggattacgtggtttgatcttaacttcaaac
aaagacgcgttcattgtaggcgcagacatcactgaatttcttggcctattcgctaagcca
gaagcagaacttgatgaatggttaagattcgctaattcaatcttcagcaagctcgaagac
cttcctgtcccaactctttcaatgatgcgtggccatgcccttggcggcggctgtgaatgt
gttctcgctaccgatttccgtattggtgacaagaccaccagcattggtttaccagaaacc
aaacttggcatcatgcctggttttggtggttgtgtgcgcctacctcgtgttatcggtgct
gacagcgcaatggaaattatcacgcaaggcaaagcatgccgcgcagatgaagcgcttaaa
gttggcttgttagatgcaattgttgaaacagaccaactactagaatcagcgatcaacact
gtttctttggcagccaatgagaaactcgattggcagctacgccgcaaacaaaaaacatca
gcgctttcactaagcaaactagaagcgatgatgagctttaccatggctaagggcttagta
gctcaaaaagcagggcctcactacccagctccgattacttcagtcattgcaattgaagaa
gcagcacgtagcgatcgtgatgcagcactcgacatcgaacgtaaacacttcgttaagcta
gcaaaatctgaagaggcgaaagcactagttggtctattcttgaatgaccaatacatcaaa
ggccttgcgaagcaagcgggtaaatcagcaaacaaagcaactgagcgtgcagccgtgctc
ggcgcaggtatcatgggcggcggtattgcttaccagtcagcattgaaaggcgtgccagtg
atgatgaaagacatcgcacaagcgtctcttgatcttggtatgaacgaagcttctaaactg
ttgaataaacgcttatcacgcggtcgcctagatggatttaagatggcaggtattctgtct
tctattactccaagcctacattacgcaggtgttgaacaatcagatgtgattgttgaagcg
gtagtagaaaacccgaaagtaaaagcagcggtactgagcgaagtggaaggtttggttggt
gaagacactgtactgacttcaaacacttctacgattcctatcaatctgctagcgaaatct
ctgaaacgtccagaaaacttctgtggtatgcacttctttaacccagtacaccgcatgcct
ttggttgagatcatccgtggtgagcacacttctgaagaaacgatcaatcgcgtggtggct
tacgcagcgaagatgggtaaatctcctatcgtggtaaatgattgcccaggcttcttcgtt
aaccgtgtacttttcccttactttggcggtttcagcatgttgctacgtgacggcgctgac
ttcactaaaatcgataaagttatggaacgcaagttcggttggccaatgggtcctgcgtac
ttgctagatgttgttggtctagacacagcacaccatgcacaagcagtaatggcgcaaggt
ttccctgagcgtatgggtaaagaaggtcgtgatgcgattgacgcactttacgtcgctgaa
aaatacggccaaaagaacggcagcggtttctacacgtatagcgtagacaaacgcggtcgt
ccgaagaaaaccttctctgaagatattcttcctatcttggctgacgtatgccaacaacca
caagactttgatgaccagacaattatccaacgtgtgatgattccaatgatcaacgaagtg
gtgctttgtttagaagaaggcattatcgcgacaccacaagaagcagatatggcactggtt
tacggtttaggcttccctccattcagaggcggcgtattccgctacttagacagtgtgggc
attggtaacttcgttgaaatggcgaaaggctaccaagacttaggtgcaatgtaccaagtt
cctcaactattgcttgatatggcagcgaaaggcgaaagcttttacgacagccaacaagca
agttctctataa

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