KEGG   Vibrio gigantis: MID13_00600
Entry
MID13_00600       CDS       T08202                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
vgi  Vibrio gigantis
Pathway
vgi03070  Bacterial secretion system
vgi05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vgi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MID13_00600 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    MID13_00600 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vgi02044]
    MID13_00600 (gspD)
Secretion system [BR:vgi02044]
 Type II secretion system
  General secretion pathway protein
   MID13_00600 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 CarboxypepD_reg
Other DBs
NCBI-ProteinID: ULN64374
LinkDB
Position
1:133875..135899
AA seq 674 aa
MKHWFKKSAWLLAGSLICTPAAIASDFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMDSGVLKIIKAKDSKTSAIPVVGDRDSVT
GDSVVTRVVTVRNVSVRELSPLLRQLNDNAGAGNVVHYDPANIILITGRAAVVNRLAEII
KRVDQAGDKEIEVVELKNASAAEMVRIVDALSKTTDAKNTPAFLQPKLVADERTNAILIS
GDPKVRSRLRKLIEQLDVEMATKGNNQVIYLKYAKAEDLVDVLKGVSDNLQSEKQSSTKG
SSSKRNQVMISAHSDTNSLVITAQPDIMNALQDVIAQLDIRRAQVLIEALIVEMAEGDGV
NLGVQWGNLETGAMIQYSNTGASIGGVMVGLEEAKDSETTTAVYDSDGKFLRNETTTEEG
DYSTLASALSGVNGAAMSVVMGDWTALISAVATDSNSNILSSPSITVMDNGEASFIVGEE
VPVLTGSTAGSSNDNPFQTVERKEVGIKLKVVPQINEGDSVQLQIEQEVSNVLGANGAVD
VRFAKRQLNTSVIVQDGQMLVLGGLIDERALESESKVPFLGDIPVLGHLFKSTSTQVEKK
NLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKAEQGLKLMADDNIPVLPKFGADMNH
PAEIQAFINQMEQE
NT seq 2025 nt   +upstreamnt  +downstreamnt
gtgaagcattggtttaagaaaagtgcatggttactggcaggaagcttaatctgcacaccc
gcagccatcgcgagtgattttagtgccagctttaagggcactgatattcaagagtttatt
aatatcgttggtcgtaaccttgagaaaacgatcatcgttgacccatcggtgcgcgggaaa
atcgatgtgcgtagctacgacgtgcttaatgaagaacaatattacagtttcttcttaaac
gtattagaggtgtatggctacgcggttgttgaaatggactcaggtgttcttaagatcatc
aaagccaaagattctaaaacttcggcaatccctgtcgttggtgaccgtgattcggtcact
ggtgatagtgttgtaacacgtgtagtgacggttcgtaatgtctcggttcgtgagctttct
cctctacttcgccaactgaacgataacgcaggtgcgggtaacgttgtgcattacgaccca
gctaatatcatcctgattactggccgagcggcagtagtaaaccgtttagctgaaatcatc
aagcgtgttgaccaagcgggtgataaagagattgaagtcgttgaattaaagaatgcatca
gcggcagagatggtgcgtattgttgacgccctaagcaaaaccacagacgcgaagaatacg
ccggcattccttcagcctaaattagttgcggatgaacgtaccaatgcgattctgatttcc
ggtgatcctaaggtgcgtagccgtctaagaaagcttatcgagcaacttgatgtagaaatg
gcgaccaagggtaacaaccaagttatctatcttaaatatgcaaaagccgaagatttggtt
gatgtgctgaaaggcgtgtcggacaatctgcagtcagagaagcaatcatcaaccaaaggc
agttcatcgaaacgtaaccaagtaatgatctcagctcatagtgataccaactctttggtt
attactgcacagccagacatcatgaatgcgttgcaagatgtgatcgcccagttggatatt
cgtcgtgctcaagtattgattgaagctctgattgttgaaatggcagaaggcgacggcgtt
aaccttggtgtgcaatggggtaacctagaaacgggtgccatgattcaatacagcaacact
ggtgcatcgattggtggtgtaatggtgggcctagaagaagcgaaagatagtgaaacgaca
accgctgtttatgattcagatggtaagttcttacgtaatgaaactaccaccgaagaaggt
gactattcaaccttagcttctgctctttctggtgttaatggcgcggctatgagtgtggtg
atgggcgactggactgcactgatcagtgcggtagccaccgattcaaactcaaatatccta
tcttctccaagtattaccgtaatggataacggcgaggcgtcgttcatcgtaggagaggaa
gttccggttctaactggctcgacggcaggctcaagcaacgataatccatttcaaaccgtt
gaacgtaaagaagtcggtattaagctgaaagtcgtgccacaaatcaatgaaggcgactcg
gttcagctacaaatagaacaagaagtgtcgaatgtattaggtgcaaacggtgcggttgat
gtgcgttttgctaagcgtcaactgaatacgtcggtgattgttcaagatggccagatgtta
gtgcttggtggcttaattgacgaacgcgcattagaaagtgaatctaaggtgccattcttg
ggtgatatccctgttctagggcatctgttcaaatcaaccagtactcaggttgagaaaaag
aatctaatggtattcattaagccaaccatcatccgtgatggcatgacggctgacggtatt
actcagcgtaagtacaatttcatccgagcggagcagttgtacaaggctgagcaaggactg
aaattaatggcagacgataacatccctgtattgcctaaatttggtgcagatatgaatcac
ccggctgaaatccaagccttcatcaatcaaatggaacaagaataa

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