KEGG   Vibrio gigantis: MID13_00870
Entry
MID13_00870       CDS       T08202                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
vgi  Vibrio gigantis
Pathway
vgi00521  Streptomycin biosynthesis
vgi00523  Polyketide sugar unit biosynthesis
vgi00525  Acarbose and validamycin biosynthesis
vgi00541  Biosynthesis of various nucleotide sugars
vgi01100  Metabolic pathways
vgi01110  Biosynthesis of secondary metabolites
vgi01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:vgi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    MID13_00870 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    MID13_00870 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    MID13_00870 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    MID13_00870 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    MID13_00870 (rfbB)
Enzymes [BR:vgi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     MID13_00870 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short KR Sacchrp_dh_NADP DUF6301
Other DBs
NCBI-ProteinID: ULN64427
LinkDB
Position
1:189161..190225
AA seq 354 aa
MKILITGGAGFIGSAVIRHIIENTQNTVINLDKLTYAGNLESLNEVSADPRYFFEQVDIC
NRAELDRVLSHYQPDAIMHLAAESHVDRSIDGPAAFIETNVVGTYTLLESVRAYWNDLEP
KKKASFRFHHISTDEVYGDLEGTDDLFTEKTSYEPSSPYSASKASSDHLVRAWLRTYGLP
TIVTNCSNNYGPYHFPEKLIPLMILNAIDGKPLPVYGDGMQIRDWLYVEDHARALYKVVT
EGEVGETYNIGGHNEKANIEVVKTICSLLEEFVPNKPKGVEQYQDLITYVTDRPGHDVRY
AIDASKIERELGWTPEESFETGIRKTVEWYLNNKQWWSRVLDGSYSMERLGQGS
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgaaaatattgatcactggtggtgctggctttattggctcagctgttatccgtcacata
atcgaaaatactcaaaatacggttatcaacttagataagctaacttatgctgggaattta
gagtcacttaatgaagtgagtgcagatcctcgttacttttttgagcaagttgatatttgt
aacagagctgaacttgatcgagttctttctcattatcaaccggatgcaatcatgcatctg
gcagcagaatcgcatgttgatcgttcaattgatgggccagcagcattcatcgaaaccaat
gtcgtcggcacttatacacttctagaatcggtgagagcatattggaacgatttagaacca
aaaaagaaagcatcatttcggttccatcacatctcgacagatgaagtttatggtgattta
gaaggcactgatgacctatttacggagaagacctcttacgagccttctagcccttactct
gcgtctaaagcttccagtgaccaccttgtacgtgcttggttaagaacctatggcttacct
acaattgtgactaactgctcaaataactatgggccgtatcactttcctgagaagttgata
ccactcatgattttaaatgcgatcgacgggaagccgttaccagtgtatggcgatggcatg
caaattcgcgattggctgtatgtcgaagatcatgctcgtgcgctttataaagttgttact
gaaggtgaggtgggtgaaacatataacatcggtggccataacgagaaagctaacattgaa
gtcgtgaaaactatttgttcgttgctagaagagtttgttccgaataagccgaaaggcgtt
gagcagtatcaagatttaattacttatgtcaccgatcgtccagggcatgatgttcgatat
gcaatcgatgcttctaaaatagagcgtgagctaggttggactcctgaagaaagctttgaa
acaggcattcgtaagacagtagagtggtacttgaataacaagcagtggtggagccgcgtg
ttagacggttcatatagtatggaaagactggggcagggtagctaa

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