Vibrio gigantis: MID13_00970
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Entry
MID13_00970 CDS
T08202
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00541
Biosynthesis of various nucleotide sugars
vgi01100
Metabolic pathways
vgi01250
Biosynthesis of nucleotide sugars
Module
vgi_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MID13_00970 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vgi01005
]
MID13_00970 (rfaD)
Enzymes [BR:
vgi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
MID13_00970 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vgi01005
]
Core region
MID13_00970 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
ThiF
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
KR
adh_short
Phage_T7_Capsid
NmrA
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ULN64446
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Position
1:complement(207986..208927)
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNDAGHNDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQV
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCVEREIPFLYASSAATY
GETETFIEEKEYEGALNVYGYSKQQFDNYVRRLTADAAAHNETLPQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQMNAGENPKLFAGSETFQRDFVYVGDVAAVNLWFLENGVSGIFNL
GTGNAESFLEVAKAVIKHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRAAGCDVVFKTV
AQGVAEYMALQNK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggtggtgctggcatgatcggcagcaatattgtgaaagcactcaat
gacgctggccacaacgatattctagttgtcgacaacctcaagaacggtaaaaagttcaag
aaccttgtagacctagacattactgactacatggatcgtgacgacttcctaactcaagtt
atggctggcgatgatttcggccctattgaggctattttccatgaaggtgcttgctcggca
acgaccgagtgggatggtaaatacatgatgcttaacaactatgagtactcaaaagagtta
ctacattactgtgttgagcgtgagattccattcctatatgcctcttcggctgcgacttac
ggtgagacagagactttcatcgaagagaaagagtacgaaggcgcattgaacgtatacggc
tactcaaaacagcagtttgataactacgttcgtcgcctaaccgcagatgctgcagcgcat
aacgagacgttacctcaaattactggtttccgttacttcaatgtttacggtccacgtgaa
gatcacaaaggcagcatggcctctgttgctttccacctaaacaaccaaatgaacgcggga
gaaaaccctaagctgttcgcaggtagcgaaacattccagcgtgattttgtgtatgtcggt
gatgttgcagcagtaaacctatggttcttagaaaacggtgtatctggtatttttaaccta
ggtacaggtaatgcggagtctttcctagaagtagcaaaagcggtgatcaagcatcacggt
aaaggtgaaatcgaaacgattcctttccctgagcatttgaaaggcgcttaccaagagttt
actcaagctgatcttacaaagcttcgagcagctggctgtgatgtggtttttaaaaccgta
gcgcaaggcgttgcagagtatatggcacttcaaaacaaataa
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