Vibrio gigantis: MID13_01140
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Entry
MID13_01140 CDS
T08202
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vgi
Vibrio gigantis
Pathway
vgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MID13_01140 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vgi03019
]
MID13_01140 (groL)
03110 Chaperones and folding catalysts [BR:
vgi03110
]
MID13_01140 (groL)
03029 Mitochondrial biogenesis [BR:
vgi03029
]
MID13_01140 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vgi04147
]
MID13_01140 (groL)
Enzymes [BR:
vgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MID13_01140 (groL)
Messenger RNA biogenesis [BR:
vgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MID13_01140 (groL)
Chaperones and folding catalysts [BR:
vgi03110
]
Heat shock proteins
HSP60 / Chaperonin
MID13_01140 (groL)
Mitochondrial biogenesis [BR:
vgi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MID13_01140 (groL)
Exosome [BR:
vgi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MID13_01140 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MID13_01140 (groL)
Exosomal proteins of breast cancer cells
MID13_01140 (groL)
Exosomal proteins of colorectal cancer cells
MID13_01140 (groL)
Exosomal proteins of bladder cancer cells
MID13_01140 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ULN64480
LinkDB
All DBs
Position
1:244505..246151
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKGLSVPCADTKAIAQVGTISANSDATVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVDLESPFILLIDKKVSNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLDLEKVTLEDLGQAKRVTITKENSTIIDGAGEEAMIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKVANLEGDNEEQNVGIRVALRAMEAPIRQITKNAGDEESVVANNVRAGEGNYGYNA
ATGEYGDMIAMGILDPTKVTRSALQFAASVAGLMITTEAMVTDKPQDSAPAMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaacgacgcacgtattaaaatgctagaaggtgta
aacgttctggctgacgcggtaaaagtaacgctaggtcctaaaggccgtaacgttgttcta
gacaaatcatttggcgcaccaacaatcactaaagatggtgtttctgttgcacgtgaaatc
gaacttgaagacaagttccaaaacatgggcgcacaaatggttaaagaagtggcttcgcaa
gcgaatgacgctgcgggcgacggaacaacaacagcaaccgttcttgctcaagccatcatc
actgaaggcctaaaagccgttgctgctggtatgaacccaatggatcttaagcgcggtatc
gacaaagcggttatcgcagctgttgaagagctaaaaggcctttctgttccatgtgcagat
actaaagctatcgcgcaggtaggtactatctctgcaaactctgacgcgacagtaggtaac
atcattgctgaagcgatggaaaaagtaggccgtgatggcgttatcactgttgaagaaggt
caggctctgcaagacgagctagatgtagttgaaggtatgcagttcgaccgcggttaccta
tctccttacttcatcaacaaccaagaagcaggttctgttgatctagaaagcccattcatc
cttctaatcgacaagaaagtttcaaatatccgtgaacttcttccgactctagaagcagta
gctaaggcatctcgcccgcttttaatcatcgctgaagatgtagaaggcgaagcgctagca
actctagttgtgaacaacatgcgtggcatcgtgaaagtggctgctgttaaagcaccaggt
ttcggtgaccgtcgtaaagcaatgcttcaagacatcgctatcctaactggcggtacagtg
atctctgaagagatcggtctagacctagagaaagtaacgctagaagacctaggtcaagct
aagcgcgtaacgatcactaaagaaaattcaaccatcatcgatggtgcgggtgaagaagca
atgatccaaggtcgtgttgctcaaatccgtcaacaaatcgaagatgcaacatctgactac
gacaaagaaaaacttcaagagcgcgtagctaagctagctggcggtgttgcagtaatcaaa
gtgggtgctgcgactgaagttgagatgaaagagaagaaagaccgcgtagaagatgcactt
cacgcaactcgcgctgcagttgaagaaggtgtggttgctggtggtggtgttgcacttatc
cgcgctgcatctaaagttgctaaccttgaaggtgacaacgaagagcaaaacgtaggtatc
cgtgttgcactacgtgcaatggaagcgcctatccgtcaaatcactaagaacgcaggcgat
gaagagtctgttgttgctaacaacgttcgtgctggcgaaggtaactacggttacaacgcg
gcgactggcgaatacggcgacatgattgctatgggtatcctagatccaactaaggtgact
cgttctgcattacaattcgcagcatcagttgctggtcttatgatcacaacagaagcgatg
gtgacagacaagcctcaagattcagcacctgcaatgcctgatatgggcggcatgggtggt
atgggtggcatgggcggcatgatgtaa
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