Vibrio gigantis: MID13_01815
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Entry
MID13_01815 CDS
T08202
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vgi03019
]
MID13_01815 (rng)
03009 Ribosome biogenesis [BR:
vgi03009
]
MID13_01815 (rng)
Messenger RNA biogenesis [BR:
vgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MID13_01815 (rng)
Ribosome biogenesis [BR:
vgi03009
]
Prokaryotic type
rRNA processing factors
MID13_01815 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ULN64584
LinkDB
All DBs
Position
1:376042..377511
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AA seq
489 aa
AA seq
DB search
MSAELLLNVTPSETRVAMIEGGALQEIHVERDARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLEKAAFLHASDIVPHTECVAENEKKQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIDSESERNRLKKVVSRYCDEHGGFIIRTAAEGADSN
ELAQDAAFLKRLWLKVLERRGKHKARTRLYGELCLSQRILRDFVGTELSKIQVDSRLEYE
NLKEFTSEYVPELTDKLELYEGDKPIFDMYDTENEIQRSLDRKVELKSGGYLIIDQTEAM
TTVDINTGAFVGRRNLEETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMLSEEHRKRV
LTSLEAALDKDRVKTNINGFTQLGLVEMTRKRTRESIEHILCSSCPACEGRGSVKTVETV
CYEILREITRVNRAYDADKFVVYAAAAVAEALEGDESHALAELEVFIGKQVKIQAEPLYI
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaattgttgctgaacgtgaccccgagtgaaactcgtgtggccatgattgaa
gggggagctcttcaagagatccatgtcgaacgagatgctcgacgcggtatcgtaggaaat
atctataaaggacgtgtaagccgtgttcttccgggaatgcaggcggcttttgtggatata
ggccttgagaaagcagcttttttacacgcctctgatattgttccacacactgaatgtgtc
gctgaaaatgaaaagaagcaatttcaggttcgtgacatttcagagcttgttcgccaaggg
caagacattgtggttcaagtggtcaaagaccctcttggtactaaaggtgcccgtttaacg
actgatatcactctaccgtctcgctatctggtattcatgccgggcgcaagccatgtcggt
gtttctcaacgtatcgacagcgagtctgaacgtaaccgtcttaaaaaagtcgtgtctcgt
tactgtgacgaacatggtggcttcatcatccgcactgctgcagaaggtgcagactcgaat
gagctggcacaagatgccgcattcttgaagcgattatggctgaaggtactagagcgtcgt
ggtaagcataaagcgcgtactcgcttgtatggtgagctttgcctaagccaacgtatctta
cgtgattttgttggtactgaactgagcaagatccaggtcgattctcgtctagaatatgaa
aacctaaaagagtttacctctgaatatgttcctgagcttacagataagcttgagttgtat
gaaggcgataagccaatctttgatatgtacgataccgagaacgaaatccagcgttcattg
gatcgtaaagtcgaattaaagtctggtgggtatctgattattgaccaaactgaagcgatg
accactgttgatatcaacactggcgcgtttgttggtcgtcgtaatctagaagagacgatt
ttcaacaccaacgtagaagcgactcaagcgattgctcgccagctgcgtttgcgtaattta
ggcggcatcatcattatcgactttattgatatgttgtctgaggagcaccgtaagcgagta
ctaacttctttagaggctgcgctagacaaagaccgtgtgaaaaccaatatcaatggcttt
acacagcttggtttggttgagatgacgcgaaagcgtacccgtgaaagtattgagcatatc
ctgtgttcgagttgtcctgcttgtgaaggccgtggcagtgtgaagacagttgaaaccgtt
tgttatgaaattcttcgagagatcacgcgagtgaatcgtgcgtacgacgccgataaattt
gtggtctatgcggcagcggctgtggccgaggcgttagagggcgatgaatctcatgcgctt
gcggaacttgaagtctttattggtaagcaagttaaaatccaggctgagcctctgtacata
caagagcagtttgatgttgttatgatgtaa
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