Vibrio gigantis: MID13_02020
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Entry
MID13_02020 CDS
T08202
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00061
Fatty acid biosynthesis
vgi00071
Fatty acid degradation
vgi01100
Metabolic pathways
vgi01212
Fatty acid metabolism
vgi02024
Quorum sensing
vgi04146
Peroxisome
Module
vgi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MID13_02020
00071 Fatty acid degradation
MID13_02020
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MID13_02020
09145 Cellular community - prokaryotes
02024 Quorum sensing
MID13_02020
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vgi01004
]
MID13_02020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vgi04147
]
MID13_02020
Enzymes [BR:
vgi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MID13_02020
Lipid biosynthesis proteins [BR:
vgi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MID13_02020
Exosome [BR:
vgi04147
]
Exosomal proteins
Exosomal proteins of breast milk
MID13_02020
Exosomal proteins of breast cancer cells
MID13_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ULN64622
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All DBs
Position
1:427485..429293
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AA seq
602 aa
AA seq
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MANLDFHIVKRLRDQIAQGGNRTALKHKVDNVWQGISWEQFGQQIDTLSLALLAQGLRVQ
DKIGIYSNNMPQWTVADFASLQARLVTVPIYPTNTAAQSSYIIQNADVKILFVGEQVQFD
AAVSLFEECEQLEVVVAMSDDIDLQDHSFAISWNDFMARGVEAQQAELDTRLADASMDDL
LTLIYTSGTTGQPKGVMLDYTNIGYQLEGHDERLSLSKDDVSLCFLPLSHVFERAWTFYV
LYKGATNCYLQDTMQVRDALSDVKPTVMCAVPRFYEKIFSAIHEKVSKAPFIRKVLFTWA
VNMGAKLSVCHQEGRAPSLMLKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGR
FFHAIGINVKLGYGMTETTATVSCWDDRCFNPDSIGMSMPGAEVKIGAKDEILVRGPMVM
RGYYKMPEETAKTFDEHGFLKTGDAGHFDENGNLFITDRIKELMKTSGGKYIAPQVVEGA
IGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKHHQIVEMLEK
RVNDLQQELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYNEKPK
DK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttagattttcatatcgtaaaaagacttcgtgaccaaattgcccaaggcggc
aaccgtacagctttgaagcataaagtagacaatgtatggcaaggcattagctgggaacag
tttggacaacaaatcgatacgctttcattagcgctgttggctcaaggattgagagttcag
gataagatcggtatctattcgaacaatatgcctcaatggaccgtggcagattttgcatct
ttacaagcacgccttgtaactgtgccgatttatccaaccaacacagcagcacagtcttct
tacatcatccaaaatgcggatgtgaagatcttattcgttggtgaacaagttcaatttgac
gcggcggtgagcctattcgaagagtgcgaacagctagaagtggttgtggcgatgtctgat
gatatcgatcttcaagaccatagcttcgcgatatcttggaatgatttcatggcacgcggt
gttgaggctcagcaagctgaacttgatactcgtcttgcagatgcaagcatggacgactta
ctgactcttatctatacctctggtaccacaggtcagccaaaaggcgtaatgcttgattac
actaatattggctaccaactagaaggccacgacgagcgccttagcctaagcaaagacgat
gtatcattgtgctttctacctctgtcacacgtatttgagcgtgcttggacgttctacgtt
ctctataaaggcgcaactaactgttacctgcaagacacaatgcaggtgcgtgatgcgcta
agcgatgtgaaacctaccgtaatgtgtgcggttccccgcttctacgagaagatcttctct
gcgattcacgagaaggtatctaaagcgccgtttattcgtaaagtgttatttacttgggcg
gtaaacatgggcgctaagctttctgtttgtcaccaagaaggtcgtgctccgtctttgatg
ctgaagaagagtcacgcactagccgataagcttgtgctatctaaactgcgcgctctgcta
ggcggtaatatcaacttcatgccatgtggtggcgcgaagctagatgagacgattggccgc
ttcttccatgctatcggcatcaacgtaaaacttggctatggtatgacagaaaccacagca
acagtatcttgttgggatgaccgctgttttaaccctgattcgattggtatgtcgatgccg
ggcgcagaagtgaaaattggtgcgaaggacgagattcttgttcgtggtccaatggtgatg
cgtggctactacaagatgcctgaagagacggctaagacgtttgatgagcacggcttcctg
aaaaccggtgatgcgggtcattttgatgaaaatggtaacctgtttattaccgaccgtatc
aaagagttaatgaaaacctctggcggcaagtacattgcaccgcaagtggtggaaggcgcg
attggtaaagatcattttatcgaacagattgctgttatcgctgatacacgcaaattcgtt
tctgcactgattgtcccttgttatgactcgctagaagagtacgctaaagagctcaatatc
aagtatcacgatcgcgttgagcttgttaagcatcaccaaatcgtcgagatgttagaaaag
cgagtgaatgacttgcagcaagagttggctaagtttgaacaagtgaagaaattcaagttg
ttgccaaaagcattttctatggatgatggcgaactgacacctactcaaaaattgcgtcgt
aaagttatcaacgataagtatcaagacgaaatcgaagaaatgtacaatgaaaagcctaaa
gataagtag
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