Vibrio gigantis: MID13_02515
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Entry
MID13_02515 CDS
T08202
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vgi
Vibrio gigantis
Pathway
vgi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MID13_02515 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_02515 (ung)
Enzymes [BR:
vgi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MID13_02515 (ung)
DNA repair and recombination proteins [BR:
vgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MID13_02515 (ung)
Prokaryotic type
MID13_02515 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ULN64715
LinkDB
All DBs
Position
1:552379..553059
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AA seq
226 aa
AA seq
DB search
MSVPKTWESIINDEREKEYFQSVLAYVEQQRNSGKTIYPPQDQVFSAFDMTPFESVRVVI
LGQDPYHGANQAHGLAFSVLPGVKIPPSLRNMYKELAQDIEGFEIPNHGYLDAWASQGVL
MLNTVLTVEEAKAHSHAKCGWETFTDTIITELNQRSEPIIFLLWGAHAQKKGQAIDTGKH
HVLTAPHPSPLSARRGFFGCQHFSTTNKLLSSVNQQPIDWHLPAEM
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaccaaagacctgggaatccattattaatgacgaacgtgaaaaagagtacttc
caaagtgttctcgcttatgtcgaacagcaacgtaatagtgggaaaacaatctacccacct
caagatcaggtattcagcgcttttgatatgacgccctttgagtctgtgcgagttgttatc
ctaggacaagacccttatcacggtgctaatcaagcacacggtttggctttctcagtattg
cccggcgttaaaatcccgccttctctacgcaacatgtataaagaactcgcacaagatata
gagggctttgagatccctaaccacggttaccttgatgcttgggcatcgcaaggggtgttg
atgttgaacaccgtacttacagtagaagaggcaaaagcacactcacacgcaaaatgcggc
tgggaaacttttaccgataccattattacagaactaaaccaacgctcggaaccgatcata
ttcttgttgtggggcgcacacgctcagaagaaaggccaagcgattgatacaggcaagcac
catgtgctgactgcacctcatccctcgccattgtctgctcgtcgcggtttctttggttgt
cagcacttttcgacaaccaataagctgctttcttctgtgaatcaacaacctatcgactgg
cacttaccagcagaaatgtag
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