Vibrio gigantis: MID13_03075
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Entry
MID13_03075 CDS
T08202
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
vgi
Vibrio gigantis
Pathway
vgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MID13_03075 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_03075 (xseA)
Enzymes [BR:
vgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MID13_03075 (xseA)
DNA repair and recombination proteins [BR:
vgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MID13_03075 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
ULN64815
LinkDB
All DBs
Position
1:complement(677746..679092)
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AA seq
448 aa
AA seq
DB search
MTNPNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLTLKDSRAQVKCAMF
RGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGKLQQEFEKLKMNLAA
EGLFAQSSKQLLPEHPKRVGVITSKTGAALFDILDVLKRRDPSLPVVVYPTMVQGEEAAI
QIAQAIGRANERNECDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIISAVGHEVDVT
IADFVADMRAPTPSAAAELVSRDNSHKEQAFESKRARLVSAIRHVLIKEAQSTQTLKYRL
EKQHPSYQLQKQSQQLDDLDMRLRRGMTQYLKQHAQRVERKQHQLQLNSPVKRLGEQKLH
LQRSEQKLLDAMDKTLLTTRHQLAMAAEKLETVSPLATLKRGYSITHSASSKTVSSINDV
EVGEVITTQVEDGVIESQVTTRVTKSEL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactaatccaaacatctttactgtttctcgcctcaactcagaggttcgtctcctatta
gaaaacgaaatgggaatagtctggctcgttggtgaaatctcaaacttctcagcccctgtc
tctggtcactggtacctcacgcttaaagactctcgcgctcaagttaagtgcgccatgttt
cgtggcaataaccgccgtgtgacctttaagcctcagaacggcaatcaagtattagtcaaa
gctcgcctgtctctctatgagccgcgcggtgactaccaacttatcatcgaaagcatgcaa
ccagaaggtgacggtaaacttcagcaagagtttgaaaagctgaagatgaacctcgccgca
gaagggctgttcgctcaatcgagtaagcaacttcttcctgagcatccaaaacgcgttggt
gttatcacctctaaaaccggtgcagcgctgtttgatattcttgatgtcctgaaaagacgc
gacccttcactgcccgtggtagtttacccaaccatggttcagggcgaagaggccgctatt
cagattgctcaagcgattggacgtgccaatgaacgcaatgagtgtgatgtgttgatcgtg
ggtcgtggcggtggttcgttagaagacctatggtgcttcaataacgagatcgtagcccgc
acaatcgctgcaagccaaatcccgattatcagcgcagttggccacgaagttgatgtcact
atcgccgatttcgtcgcagatatgcgcgctccaacgccatccgcagccgctgaattggtt
agccgtgataatagccataaagaacaagctttcgagtctaaacgtgctcgcttagtgagt
gcgattcgtcatgtgctaatcaaagaagcgcaatcaactcaaacgttgaaataccgctta
gagaagcaacaccctagctaccaactgcaaaagcagagtcagcagcttgatgacttagac
atgcgtttgcgtcgtggtatgactcaatatctaaagcagcatgcacagcgtgttgagcgc
aaacagcaccagcttcaattaaactcgccagtgaaacgacttggtgaacagaaactgcat
ctgcaacgttcagagcaaaagctgttggatgcaatggacaagacattactaacgactcgc
caccagctagccatggctgcagagaagttagaaaccgtcagcccgctggcgactctaaag
cgcggctacagcattactcattcagcatcgagcaagacggtatcatcgattaacgatgtc
gaagtcggcgaagtgatcaccactcaagttgaagacggtgtgattgagtcgcaagtaaca
acaagagtgactaagagcgagctttaa
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