Vibrio gigantis: MID13_03300
Help
Entry
MID13_03300 CDS
T08202
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vgi
Vibrio gigantis
Pathway
vgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MID13_03300 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_03300 (recC)
Enzymes [BR:
vgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MID13_03300 (recC)
DNA repair and recombination proteins [BR:
vgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MID13_03300 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ULN64857
LinkDB
All DBs
Position
1:736348..739824
Genome browser
AA seq
1158 aa
AA seq
DB search
MFTVYHSNKVDTLKILLVHLIKSDPLANPFEKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWDMFTQVLPDVPKRSAFNKEAMTWKLMSLLPAKLDHSDFLPLQRYLENDED
DSKLYQLAEKIADIFDGYLVYRPEWMAMWEAGEPVTELVDSEGQQEHPWQPILWKALYEQ
TLSQGQSKYHRGNLYHDFIEALASQQGQLQHLPKRLFVFGISSLPPRYMDALKALGEQID
VHLMFTNPCQHYWGDIRDRKYLARVEAQRRKQFALVDGLPQLEGEVSPLKDGIEANVEDE
LHTSQAVGNSLLASMGKLGRDNLFLLSQSDSEEHEFFIDVERDSLLHQLQADILELEEHQ
DDHILDSSNHKQVVELGDRSLTVHACHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVA
DINAYSPAIQAVFGNAPGERYIPYSISDRTADQESPILTAFMQLVALPNTRCLASELLEL
LEIPAMMARFGIDEFQFEQAKQWVEEAGIRWGVDASTATEFDLPATEQNTWLFGIQRMLL
GYAMSDSAGLFETEHSPIAAYNEVQGINAELAGKLAHFIDRIAHYRQRLAETQSIDMWRE
TLLQMIDDFFAVELEGEVVLKSIRDALSQLNEQLDDALYEQELSPSIIYQYLNNKLSGAR
ISQRFLAGQVNFCTLMPMRSIPFKTVCLLGMNDGVYPRSMPPEGFDLMNGRTRPGDRSRR
DDDRYLFLEAMLSAQECLYISYVGRSIQDNTERVPSVLVSELIEYCQQNYCLSDDQALPS
DDSGIKLTQAISFEHTMTPFSPAAFTQGNESHVLSYAKEWLPAANRSGERSGEFNRALDD
YLFGATYPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPLPVMEDDEPFVLNGLESFQLK
DALLQVLLDHPERADEAVRLFVSEQKAQGRLPVGAFGDIEFETNRVQAEDLAKEIRFVSG
QPQQDLEVNFEFDVLGEGKPVRLMGWLTQNYQSGLVRFRSGKIRSQDYLAAWIDHLCCAV
MGHGKTTHIIGYDRKEGVVHQTLQPIGDTQQAKSLLAELVRLFYQGMTAPLPYFPKTALA
GVEASFSRGKWVDDEEKSLKKMADTFNDSFAFTGEGRDTYISRIWPKWGDELAADSRMYS
TLVLQAARLAAADLEDQG
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtttaccattccaataaagttgatactttaaaaattcttctcgttcactta
atcaaaagtgaccctttagccaatcctttcgaaaaagagcagatcttggttcagagccca
ggtatgtctcagtggcttaagatggaactcgccaaagagtttggcgtagcagcaaatatc
gacttcccactcccagcaaccttcatttgggatatgtttacccaagtgcttcctgatgtt
cctaaacgcagtgcttttaacaaagaagcgatgacgtggaagctgatgagtttgctaccc
gcgaaacttgaccactctgatttcttacccttacaacgctatcttgaaaacgatgaagat
gattcgaagctgtatcaattagctgagaaaattgccgatatattcgatggctacttggtt
tatcgacctgaatggatggcgatgtgggaagcgggagaacccgttacagaattggtagat
agtgaaggacaacaagaacacccttggcagccaattttgtggaaggcactttacgagcaa
accctgtctcaaggccaatcaaaatatcaccgtggtaacttgtatcacgactttattgaa
gcgctagccagccaacaaggtcagttacaacatctgccgaaacgcttatttgtgtttggc
atttcgtcactgcctcctcgttacatggatgccttgaaagcgttgggtgagcagattgat
gtgcacctgatgtttaccaacccttgccaacattactggggcgacatacgcgaccgtaaa
tacttggctagagtggaagcgcaacgtcgtaagcagtttgctctggttgatggcttgcct
cagctagaaggtgaagtctcaccattgaaagacggtattgaagccaacgttgaagatgaa
ctgcatactagccaagcggtaggtaatagcttactcgcgtctatgggtaagctagggaga
gataacctgttcttgctatctcaatcagacagcgaagagcacgagttctttattgatgta
gagagagacagtctgctgcatcaactgcaagccgatattcttgagctagaagagcaccaa
gacgatcacatcttagactccagcaaccataaacaagtggttgagctgggcgatcgttcg
ttgacggtacatgcttgtcacagccctatgcgtgaggttgaagttcttcatgatcagctg
ctagcaatgtttgacgctgacccgacattaaagccacgcgacatcatcgtgatggtggca
gacatcaacgcttacagtcctgcgattcaggcggtatttggtaatgctccgggtgagcgt
tatatcccttactcgatctcggataggacggcagatcaagagagcccaattctgactgcg
ttcatgcagctggtcgcgctaccaaacacgcgctgcttagcttctgaacttctagagctg
ttagaaatccctgcgatgatggcacgctttggtattgacgagtttcaattcgagcaagcc
aaacaatgggttgaagaagcgggtatccgttggggcgtcgatgcttctaccgcaaccgag
tttgacttgcctgccaccgagcaaaatacctggctatttggtatccagcgcatgctactg
ggctatgcgatgtcggattctgcaggtttgtttgaaactgaacactctccaattgcagct
tataacgaagttcagggcattaacgccgaacttgctggtaaattagcgcactttattgat
cgtattgcccattaccgtcaacgtcttgctgagacgcaatccatcgatatgtggcgtgaa
accttgctacaaatgattgatgatttcttcgccgttgagctagaaggcgaggtggtgctt
aagtcgattcgtgatgcactttctcaactgaatgaacagcttgatgatgccttgtacgaa
caagagctatcgccaagcatcatctatcagtacttaaacaataaactgtcaggcgcgcgt
atcagtcagcgtttcttagcggggcaagttaacttctgtaccctgatgccgatgcgttct
attccgttcaaaactgtttgtctattaggcatgaatgacggtgtttacccgcgatcaatg
ccgccagaagggtttgatttgatgaatgggcgtactcgtcccggtgaccgttctcgtcgt
gatgatgaccgttacctattcttagaggctatgttgtcggcgcaagagtgtttgtacatc
agttatgtcggccgctcgattcaagataatactgagcgagtaccgtcggtattggtttca
gagttgattgagtactgccagcagaactactgcctaagtgacgatcaagcgctaccaagt
gatgattctggtattaagctgactcaagcgatcagctttgaacacactatgacgccgttc
agcccggcagcttttacacaaggtaatgaaagccatgtattgagctacgccaaagagtgg
cttccagcggctaaccgttctggtgaacgcagtggtgaattcaatcgtgccttggatgac
tatttgtttggtgcgacttatccgttagaactcgatttggttgagctacagcgtttttgg
cgcttgccggtgcaatacttctttaatcgtcgcttaaaggtagtgtttgagccaccgctt
ccggttatggaagacgatgagccgttcgtgcttaatggcttagagagcttccagcttaag
gacgccttgctccaagtactactcgatcacccagaaagggcagatgaagcggttcgcttg
tttgtctctgagcaaaaagcccaaggtcgattaccggttggcgcttttggtgatatcgag
ttcgaaaccaaccgcgttcaagcggaagacttagccaaagagattcgatttgtaagtggg
cagccacagcaagatctcgaggtaaattttgaatttgacgtgctaggcgagggcaaacca
gttcgtttgatggggtggctgactcaaaactatcaatcgggtttggtacgcttccgtagt
ggcaaaattcgttcgcaagattacttggccgcgtggattgatcacttgtgttgtgcagtg
atggggcatggcaaaacaacccatattattggctatgacagaaaagaaggcgtagttcac
caaacgctacaacctatcggcgatacgcagcaggcaaagagtttattagctgagttagtt
cgactgttttatcaaggtatgacagcaccactgccgtatttccctaaaaccgctttggcc
ggcgttgaagcgagctttagccgcggtaaatgggtcgatgatgaagagaagtcgctcaag
aaaatggccgatacttttaatgacagcttcgctttcactggcgagggcagagatacctat
atctcacgtatttggcctaaatggggcgatgaattggctgctgattcgcgtatgtattca
acgcttgtgttacaggcggcaaggttggcggcagccgatctggaagatcaggggtaa
DBGET
integrated database retrieval system
