Vibrio gigantis: MID13_03500
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Entry
MID13_03500 CDS
T08202
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00550
Peptidoglycan biosynthesis
vgi01100
Metabolic pathways
vgi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MID13_03500 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MID13_03500 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vgi01011
]
MID13_03500 (mrdA)
Enzymes [BR:
vgi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MID13_03500 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vgi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MID13_03500 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ULN64895
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All DBs
Position
1:complement(785064..786956)
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AA seq
630 aa
AA seq
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MLRKRSQIRDYKAEARLFTSRAFVAFAGIIVMMSMLVVNLYNIQVNQYQDYKTRSNDNRI
KVVPIAPNRGLIYDRNGVLLAENRPVFNLEIIPEKIKDMDDTLARLQALIEIPPERIERF
DRDRRNSRRFKSVPILNQLTEEQVAVFSVNQHKFPGVEVTGTLKRFYPYGDVLTHVIGYV
SRINDRDMQRLAREEKDANYQATRDIGKLGIERYYEDMLHGTAGYQEVEVNSRGRVIRTL
KFVPSVPGKDIVLNLDIKLQLYVHKLLDGRRGSAIVLDPKDNGVLAMVSSPSYDPNAFVH
GISSKGYNALLQDKDRPLVNRATLGIYPPASTIKPFIAVAALQEGVITPNTTRNDPGYWK
IPNSKTRPFRDWLRWGHGVVDIEKAIEESVDTFFYQIAYDLGIDRISKWMMMFGFGDYTG
IDIYEESKANMPTRDWKMARHRVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNEGEV
TAPHLLRATIDNGRPFDEQVMSDIETYPPLTGVKKKYWNIAQEGMRLANHGKKGTARRSF
QKMSYQTAGKSGTAQVFGLKEDEEYNADEIAEHLRDHALFTGYAPFEDPEAVVTIVLENA
GGGSSNGGPVVRRILDHIILAEDYQSEPIK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtaaacgtagccaaatccgtgattacaaagcagaagcacgactatttactagt
cgtgcttttgttgcgtttgcggggatcatagttatgatgtcgatgttggttgttaacctg
tacaacattcaggtcaatcaataccaagactataaaactcgttctaacgacaaccgtatc
aaggtcgttccaatcgcacccaaccgtggtttgatttacgatcgcaacggtgtgcttctt
gccgaaaaccgcccggttttcaatctagaaatcatacccgaaaaaatcaaagatatggat
gacacgcttgcccgtctacaagcgctaatcgagatcccaccagaacgtatcgaacgtttt
gatcgtgatcgccgtaattcacgtcgtttcaagtcagtgcctattctcaatcagcttacc
gaagaacaggttgcagttttctctgtaaaccaacataagttcccaggtgttgaagttaca
ggtacgttaaaacgtttctacccttatggtgatgtactgactcacgtgattggctacgta
tcgcgcatcaacgaccgtgatatgcagcgcctagcaagagaagagaaagacgccaattac
caagctactcgcgacataggtaagcttggcattgagcgctactacgaagacatgttgcac
ggtaccgctggctatcaagaagtcgaagtcaacagtcgtggacgagtgatccgtactctt
aagtttgtgccttcggttccgggtaaagatatcgtgctcaatttggatatcaaactacaa
ctatacgtacataagttacttgatggccgccgtggttccgctatcgttctcgacccaaaa
gacaatggcgtgttagccatggtctcaagcccgagctatgacccgaatgcgttcgtacat
ggtatttcgtctaaaggttataacgccctgcttcaagataaagaccgccctttggttaac
cgtgcaacgctaggtatttatccaccagcatcgacgatcaaacccttcattgctgttgca
gctctgcaagaaggtgtgattacaccgaatacaacgcgtaatgacccaggttattggaag
atccctaattcaaaaacaagaccattccgtgactggttacgttggggacacggtgtcgtt
gatatagagaaagcgattgaagagtcagtagataccttcttttaccaaattgcttatgac
cttggtattgatcgcatatccaaatggatgatgatgtttggatttggcgactacacgggt
atcgatatttatgaagaaagcaaagccaatatgccaactcgtgattggaagatggcaagg
caccgcgtaccttggtaccaaggtgacaccatcccagtgggcattggtcaaggctactgg
actgcaacaccaatgcagatcgcaaaagccacatcagtcttggtgaatgaaggcgaagta
acggcacctcacctgctgcgtgcaaccattgataacggccgcccattcgacgaacaagtc
atgtcggacattgaaacttatccaccgctaaccggggtgaagaagaaatattggaatatc
gcgcaagaaggtatgaggctagctaaccacggtaagaaaggcaccgcaagacgttcattc
cagaagatgtcttaccaaaccgctggtaaatctggtaccgcacaggtattcggcttgaaa
gaagatgaagagtacaacgcagatgaaatcgcagagcacttacgcgatcacgccctcttt
accggttacgcgccttttgaagaccctgaagccgtcgtaactatcgttctagagaacgca
ggtggtggttcttctaacggcggcccagtagtaagaagaattttggaccatattatcctt
gcagaagattatcaaagtgagccaattaaataa
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