Vibrio gigantis: MID13_03515
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Entry
MID13_03515 CDS
T08202
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vgi
Vibrio gigantis
Pathway
vgi03030
DNA replication
vgi03430
Mismatch repair
vgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MID13_03515 (holA)
03430 Mismatch repair
MID13_03515 (holA)
03440 Homologous recombination
MID13_03515 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vgi03032
]
MID13_03515 (holA)
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_03515 (holA)
Enzymes [BR:
vgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MID13_03515 (holA)
DNA replication proteins [BR:
vgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MID13_03515 (holA)
DNA repair and recombination proteins [BR:
vgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MID13_03515 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Shikimate_DH
Zot
Motif
Other DBs
NCBI-ProteinID:
ULN64898
LinkDB
All DBs
Position
1:complement(787819..788844)
Genome browser
AA seq
341 aa
AA seq
DB search
MRIFADRLSEQLAKQLSNVYLIFGNEPLLLQESREAIQKAAKQQGFEERHRFAIDSSLDW
NQVYDCTQALSLFSSRQVIELELPESGVNAAIAKELLAISEHIHNDILLILVGTKLTKAQ
ENAKWFKALSNQGHWVSCLTPDVSRLPQFVQARCRQIGLTPDPEAIQMLAQWHEGNLFAL
TQSLEKLALQYPDGKLTLVRLEESLSRHNHFTPFHWSDALLAGKGNRAQRILRQLEAEGV
EPVILLRSVQRELTLLLQMQQQMKQMPIGQVFEKHRIWQSKKPLYNAALTRVSISQLHSL
FALLTQAELMTKTQYEQSPWPLIHQLSVEFCIPSASIPFHA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatttttgctgaccgcttatcagagcaacttgctaaacagttgagtaatgtttac
ctcatttttggtaacgagcctctactgttacaagagagccgagaagcgattcaaaaggct
gcaaaacagcaaggctttgaagaacgtcaccgctttgcgattgatagcagtctggactgg
aatcaagtctacgactgcactcaagcactgagcctattctctagccgtcaagtcattgag
cttgagctgccagagtcaggcgtcaatgccgcaatagcaaaagagctactcgcaatctcc
gagcatatccataacgatattttgttgatcttagtgggtactaaattaactaaagctcaa
gaaaacgctaagtggtttaaggctctctcgaatcaaggacactgggtcagttgcttaacg
ccagatgtcagtcgattacctcaatttgtccaagctcgctgccgtcaaataggtttaacg
ccagatcctgaggcgattcaaatgttggcacaatggcacgaaggcaacctttttgcattg
actcagagcctagagaaattggcgctacaatacccggatggaaagctcactttagtgcgc
ttagaagaatcgctgagtcgccacaaccactttacgccgttccactggagtgacgcctta
ctggcgggtaaagggaatcgagcgcagcgaattttaagacaattagaagctgagggtgtt
gagcctgttattttactgcgtagcgtgcagcgagaactcaccttactgcttcaaatgcag
caacaaatgaaacagatgccgattggtcaggtcttcgagaaacaccgcatctggcaatca
aaaaagccgctttataacgccgcgctaacaagagtttcgatttctcaattacactctttg
ttcgcgttgctcactcaagctgaattgatgacaaaaactcaatatgagcagtcgccttgg
ccactaattcatcagttaagcgtagagttttgtatcccttcagcttcaataccattccac
gcataa
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