Vibrio gigantis: MID13_05220
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Entry
MID13_05220 CDS
T08202
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
MID13_05220 (lapB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_7
Zn_ribbon_LapB
TPR_1
TPR_12
TPR_16
TPR_8
TPR_20
ARM_TT21_5th
TPR_Slam
TPR_11
ANAPC3
TPR_9
ARM_TT21
TPR_CcmH_CycH
TPR_NPHP3
TPR_15
TPR_5
Zn_ribbon_15
SPG48
ARM_TT21_4th
HypA
HAT_Syf1_CNRKL1_C
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ULN65205
LinkDB
All DBs
Position
1:1141517..1142692
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AA seq
391 aa
AA seq
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MLELLFLLLPIAAAYGWYMGNRNAQQEKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIE
LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVS
GFLDRAEKIFEQLVEEPDHKEGALQQLVAIYQQTREWNKAIHYGNILVKLGKKKMKMRAT
VAHFWCELAMLEQADGNRSKALQHFKKALSEDPKCVRASIALGKFHLANEDYQKTIDCLE
SVLEQDIDFISEVLPTLAECYQKLGQEAQLVEFLKACIQKKAGVSAELMLAQLVAHHEDV
GSAQELLTKQLVKNPTMKGFYRLIDYHLAEAEEGRAKDSLTTLQSMVGEQLKVKPHYRCR
QCGFSTHSMYWHCPSCKGWGTIKPIRGLDGE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgttagagttactgttcttacttttgcccattgcagctgcttatggctggtatatgggt
aatcgtaatgctcagcaagaaaaacaaaagcaatcacaccagatctcccgtcaatacgtg
acgggtttgaacctattactgtcagatcaatctgacaaagcggttgatcacttcattgag
ctacttcaagtagacaatgaaaccattgatactcacttggctttgggtaacttgttccga
tcaagaggcgaagtcgaccgcgctattcgtattcaccaaaatcttatctctcgttcgggg
cttaccctcgatcagaaaaacctcgcactgcaacaattagcaaaagactacatggtctca
ggcttccttgatcgcgccgaaaaaatctttgaacagcttgtagaagaacctgaccataaa
gagggggctttgcagcagttggttgctatttatcagcaaactcgagagtggaacaaagct
atccattacggaaatatcctcgttaagcttggtaagaagaaaatgaagatgcgtgcgaca
gtggcgcatttttggtgcgagcttgcgatgctggagcaagctgatggtaaccgctctaaa
gcacttcagcacttcaagaaggcgctgtctgaagatcctaaatgtgtacgtgcaagtatc
gctctaggtaagttccatttagcgaacgaagattaccaaaagacaatcgattgtcttgaa
tcggtacttgagcaagatatcgattttattagtgaggtgctgccaacccttgctgagtgt
tatcagaagcttggacaagaagctcaattggtcgagttcctcaaagcgtgtattcagaag
aaagcgggcgtatccgctgaattaatgctcgctcagttggttgctcaccatgaagatgta
ggctctgctcaagagttactgaccaagcagcttgttaagaatccaaccatgaaaggcttc
tatcgattaatcgattatcacctagcagaagcagaagaaggccgagcaaaagacagctta
accacacttcaatctatggttggtgaacagcttaaggttaagccccattaccgttgtcgt
cagtgtgggttctctacacactcaatgtattggcattgcccttcatgtaagggatggggg
acgatcaagcctattcgtgggcttgatggtgaatag
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