KEGG   Vibrio gigantis: MID13_05960
Entry
MID13_05960       CDS       T08202                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
vgi  Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:vgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vgi03400]
    MID13_05960
DNA repair and recombination proteins [BR:vgi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     MID13_05960
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 SLFN-g3_helicase AAA_22 DUF7577 zf-tcix DZR Zn_ribbon_3 SNF2-rel_dom T1R_D3-like AAA_16
Other DBs
NCBI-ProteinID: ULN65349
LinkDB
Position
1:complement(1293918..1295660)
AA seq 580 aa
MYTLRPYQADSVKSVIHYFRKHQTPAVLVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHEKYEGYGLKGSIFSAGLGRKETDQQVVFASVQSVVRNLDSFSNQFSLLVIDECHR
VPDEKTSSYQKVITHLRENNSGIKVLGLTATPYRLGMGWIYQYHTRGQVRSDEPRFFRDC
IFELPIRYLLDEGFLTPARMIDAPVLSYDFSQLKPASTGRYKEAELDMVIEQSKRATPQI
VDQIIHLAQDKLGIMVFAATVRHAQEILGLLPEGEASIVIGDTPTLERDQIISDFKERKI
KFLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKKECLVLDYAGNSY
DLYQPEVGDPKPDSDSETITIPCPACGFNNNFWGKLDSNGFLLEHFGRKCQGYFTDEDTG
EREHCNYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECLEMD
LNVLKDDKGKSQLKVTYRGENQAQVHEFWSLTTKKQKQNFKDQFVRPHLADRHRPFEEAS
PSKVVAHQHRFRPPQFVIARKVGRFWKMRDKIFEDELQQR
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgtatacactccgcccgtaccaagctgattccgtaaaatcagtgattcattacttcaga
aaacaccaaactccggctgttctcgtgcttccgacaggtgcaggaaaaagccttgtgatt
gcagagctggcaaggcttgcgaaaggtcgtgtattggtacttgctcacgtaaaagagttg
gttgaacagaaccatgaaaaatatgaaggttacggactaaaaggatcgattttctcggcg
ggtttaggccgtaaagagacagaccaacaagtggtgtttgcttcggtgcaatccgttgtt
cgaaacctcgactcattctctaaccaattttcactgttggttatcgacgaatgccatcgt
gttcccgatgaaaagaccagtagctatcaaaaagtaatcactcacttgcgagagaataat
tctggtatcaaggtgcttggattaacggctaccccatatcgtcttgggatgggctggatt
tatcaatatcacactcgcgggcaagtgcgttcagatgagccacgcttcttccgcgactgt
atttttgagctgccgattcgttacctgctcgacgaaggcttcttaacgcctgcacgcatg
atcgatgcacccgttttgagctacgacttttcgcagttaaagcctgctagcacaggtcgc
tacaaagaggccgaactcgacatggtgatagagcaatcgaagcgagcgactccacaaatt
gtcgaccaaatcattcatctagcccaagacaaactcggcatcatggtgttcgctgcgacc
gttagacacgcgcaagagatcctcggcttattgccagaaggggaagcttcaattgtgatc
ggcgacacaccaacactcgaacgtgaccaaatcatcagtgatttcaaagagcgtaaaatc
aagttcttggtcaacgtatcggtattaaccacaggttttgatgcgccgcacgtcgattta
atcgctattttacgcccgaccgaatccatcagtttatatcaacaaatcgttggccgcggc
ttacgcctatctccagggaaaaaagagtgtttggtactcgactatgcaggtaacagttac
gacctttatcaacctgaagtgggcgatccaaaacccgattcagacagtgaaaccatcaca
atcccctgcccagcttgcggcttcaataataacttttgggggaaattagacagcaatggt
ttcctgcttgaacactttggtcgtaaatgccaaggctactttaccgatgaagacacaggc
gaacgtgaacactgtaattatcgttttcgtgcaaaatattgcggtgaatgtggcgccgat
aacgacattgccgcgcgtatttgccatgagtgcgatgcaaccttagtagacccagacaaa
aagctaaaagaagcactgaatctaaaagatgccttggtatttgagtgtttagaaatggac
ctcaacgtgcttaaggacgacaaaggtaaatcacaacttaaagtcacttaccgtggtgaa
aaccaagcgcaagtccatgagttttggtcattaaccaccaagaaacagaagcaaaacttc
aaagaccagtttgttcgccctcaccttgcagacagacatcgtccttttgaagaggcctca
ccgtcgaaagtggttgctcaccaacatagattccgcccacctcaattcgtgattgcacgt
aaagtaggacgcttttggaaaatgagagataagatattcgaagacgaactccaacaacgc
tag

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