Vibrio gigantis: MID13_09600
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Entry
MID13_09600 CDS
T08202
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vgi03032
]
MID13_09600 (gyrA)
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_09600 (gyrA)
Enzymes [BR:
vgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MID13_09600 (gyrA)
DNA replication proteins [BR:
vgi03032
]
Prokaryotic type
DNA Topoisomerases
MID13_09600 (gyrA)
DNA repair and recombination proteins [BR:
vgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MID13_09600 (gyrA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
TPD52
Motif
Other DBs
NCBI-ProteinID:
ULN63187
LinkDB
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Position
1:complement(2157898..2160558)
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AA seq
886 aa
AA seq
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MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVVDGCLAFINNEDITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKV
YMRSKADIEVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNIKDMLKCFVDHRREV
VTRRTIFELKKARDRAHILEALSLALANIDEIIELIKSAPTPAEAKVGLVSRGWDLGNVA
SMLERAGTDAARPDWLEDQYGIRDGQYFLTETQAQAILELRLHRLTGLEHEKILDEYKAL
LEEIAELMHILASTERLMEVIREELEAVREIYGDERRTEITAAVHDIDMEELIAQEDVVV
TLSNAGYVKYQILSDYESQRRGGKGKSATKMKDEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEEGERITAILPVSEFSNEKFIFMATGDGTVKKTSLD
QFANVRANGLIAVNLRDDDSLIGVDITNGDSDIMLFSKSGKVVRFNEDKVRAMGRTASGV
RGMKLPEDDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDENVVGLQRIDE
VEEAEIVEGEAEEANAETTNAEVSESSEEQASDASDFESDSEQDSE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagcgaaagagatcacgcccgtaaatattgaagatgagcttagaggttca
tacctagactacgcgatgtccgtcatcgttggtcgtgcccttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttgttcgcgatgaatgtactaggtaatgattggaac
aaaccatataaaaagtctgctcgtgtagtaggtgatgtaatcggtaaataccacccgcat
ggtgatagtgctgtatacgatacaattgttcgtatggctcaaccgttctcactgcgttac
atgctagttgatggccaaggtaactttggttctatcgatggcgactccgcggctgcaatg
cgttataccgaagttcgtatggcgaaaattgctcacgagctcctggctgaccttgataag
gaaactgtggattacgtaccgaactatgatggtacagaacaaattccagcagtacttcct
acaaaaattcctaacctattggtaaacggtgcttctggtatcgcagtaggtatggctacc
aacatcccaccacataatcttggtgaagttgttgatggctgtttagcatttatcaataat
gaagatattactattgatgagctaatggactatatccctggtcctgacttcccaacagca
gcacttatcagtggtcgtaaaggcatcgtagatgcatacaagactggccgcggtaaggtt
tacatgcgttcaaaagcggatatcgaagtagagaagaatggtaaagagaccattatcgtt
actgagatcccttaccaagtaaacaaagctcgtttgatcgagaagattgctgaactggtt
aaagataagaaagtagaaggcatcagtgcactgcgtgacgagtctgataaagacggtatg
cgtattgttattgaatgtaagcgtgatgcagtaggcgaagtggttcttaacaacctatac
gctcaaactcaactgcaaacgactttcggtatcaacatggttgcgttgaacaacggtcaa
ccacagttgttcaacattaaagacatgcttaagtgcttcgtagaccaccgtcgcgaagtt
gtgactcgtcgtactatcttcgaactgaagaaagcgcgcgaccgtgcacacatccttgaa
gcattgtctctggcacttgctaacattgatgaaatcattgaactgatcaagagcgcgcca
acaccagcagaagctaaagttggtttagtgtctcgtggttgggatcttggtaacgttgct
tcaatgcttgagcgtgctggtacagatgcggctcgtcctgattggttggaagaccaatac
ggcatccgcgatggccagtacttcctaacggaaacacaagcgcaagctattctagaactt
cgtcttcaccgcctaactggccttgagcacgagaagattctagacgagtacaaagcactt
ctagaagaaatcgctgagctaatgcacattcttgcaagcactgagcgtttgatggaagta
atccgtgaagaacttgaagcggtacgtgagatctatggcgacgagcgtcgtacagaaatt
acagcggcagttcatgacatcgacatggaagagctgattgctcaagaagacgttgtagta
acgctttctaacgcaggttacgttaagtaccaaatcctaagcgactacgaatctcaacgt
cgtggtggtaaaggtaagagtgcaactaagatgaaagatgaggattacattgagcgtctg
cttgttgctaatactcacgataacatcctatgtttctctactcgtggtaagacataccgc
ctgaaagtttaccaactaccattagcaagtcgtactgctcgtggtaagcctatcgttaac
attcttcctctagaagaaggtgagcgtattacagctatcctgcctgtttctgagttctct
aacgagaaattcatcttcatggcaacaggtgacggtaccgttaagaagacatcactggat
caattcgcaaacgtacgtgctaacggcctaatcgcagttaacctacgtgacgacgattca
ctgattggcgttgatatcactaacggtgatagcgacatcatgctgttctctaaatcgggc
aaagttgttcgctttaacgaggacaaggtacgtgcaatgggccgtactgcctctggtgtt
cgtggtatgaagcttccagaagacgatcaagtggtttcactgattgttccttctaacgaa
ggcgatatcctaactgtgactcaaaacggttacggtaagcgtactgagctagcagaatac
ccaacgaaaggccgtgcaacgcaaggtgtagtatctatcaaagtctctgaacgtaatggc
ccagttgttggcgctgttcaagttgaagaaggcgatgagatgatgatgatcaccgacgca
ggtacgctagtacgtactcgcgtagcggaagtaagccaagtcggtcgtaacactcaaggt
gtaacactgattcgcactgctgaagacgagaatgttgtaggtctacaacgtatcgacgaa
gtagaagaagctgagattgtagaaggcgaagctgaagaagctaatgctgaaactaccaac
gctgaagtttccgaatcaagtgaagagcaagcatcagatgcttctgactttgaaagtgat
agcgagcaagactctgagtaa
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