Vibrio gigantis: MID13_11050
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Entry
MID13_11050 CDS
T08202
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vgi03016
]
MID13_11050 (truA)
Enzymes [BR:
vgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MID13_11050 (truA)
Transfer RNA biogenesis [BR:
vgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MID13_11050 (truA)
Prokaryotic type
MID13_11050 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ULN63460
LinkDB
All DBs
Position
1:complement(2495587..2496381)
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AA seq
264 aa
AA seq
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MKIALGIEYNGTHYFGWQRQRDVKSVQEELEKALSVVANHPVEVMCAGRTDAGVHGTGQV
VHFETNVDRKMVAWTMGANANMPKDIAVRWATEVNEDFHARFSATARRYRYIIFNHALRP
GILNSGVSHYHGHLDEKKMHEAGQYLLGENDFTSFRATHCQSRSPWRNMIHLNVTRHGHY
IVIDIKANAFVHHMVRNITGSLIAVGKGEQKPEWIQWLLEAKDRKVAGATAKAEGLYLVD
VDYPEHFELPREPIGPLFLPDNLN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctttaggtattgaatataacggtacccactactttggttggcagcgccaa
cgagacgtgaaaagtgtccaagaagaattggaaaaggctctttcagttgtcgcgaatcat
cctgtagaagttatgtgcgcaggtcgtacagatgcaggtgttcacggtacgggacaagtc
gttcactttgaaactaatgtcgatcgtaaaatggtggcatggacaatgggcgcgaatgcc
aatatgccaaaagatattgcggttcgttgggcgacagaagtgaatgaggatttccatgct
cgtttctctgctactgctcgccgttatcgttacattatctttaaccatgcactgcgccct
ggcattttgaattcaggcgtgagccattatcatggtcatcttgatgagaaaaaaatgcac
gaagcaggtcagtacttacttggtgagaatgactttacttcgttcagggcaacacattgt
caatctcgtagcccatggagaaacatgattcacttgaacgtgactcgccatggacactac
attgtgattgatattaaagcgaatgcgtttgttcaccacatggtgaggaatatcactggt
agccttattgccgtaggtaaaggtgagcagaaaccagagtggatccagtggcttttagaa
gctaaagatcgaaaagtagccggcgcaactgcaaaagcggaaggtttgtatctggtggat
gttgattatccagaacattttgagctaccacgagagccaatcggtcctctatttttgccg
gataatttgaactaa
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