Vibrio gigantis: MID13_11160
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Entry
MID13_11160 CDS
T08202
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00061
Fatty acid biosynthesis
vgi00071
Fatty acid degradation
vgi01100
Metabolic pathways
vgi01212
Fatty acid metabolism
vgi02024
Quorum sensing
vgi04146
Peroxisome
Module
vgi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MID13_11160 (fadD)
00071 Fatty acid degradation
MID13_11160 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MID13_11160 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MID13_11160 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vgi01004
]
MID13_11160 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vgi04147
]
MID13_11160 (fadD)
Enzymes [BR:
vgi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MID13_11160 (fadD)
Lipid biosynthesis proteins [BR:
vgi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MID13_11160 (fadD)
Exosome [BR:
vgi04147
]
Exosomal proteins
Exosomal proteins of breast milk
MID13_11160 (fadD)
Exosomal proteins of breast cancer cells
MID13_11160 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
ULN63479
LinkDB
All DBs
Position
1:complement(2522095..2523789)
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AA seq
564 aa
AA seq
DB search
MDKPWLSRYPSDVPETINPDQYPSLVEMFEQSVQKYADQPAFENMGSIMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPIALFGVLRAGMIAVNVNPLYTPRELEHQLNDS
GAKAIVIVSNFASTLEKVVDNTPVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISFRKALHKGRRLQYVKPFMAGDDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYGPVLQEGRELVVTALPLYHVFALTVNCLLFVEMGGRNLLITNPRDIPGFIKELQKVPF
TAITGVNTLFNALVNNEDFHELDFSNMRLSVGGGMAVQRAVAEQWKKVTGVHLLEGYGLT
ECSPLVTGNPYDLKDYTGAIGLPVPSTEVRIVDDEGKVIANDQVGELQVRGPQVMQGYWQ
RPEATKEVIDQDGWLSTGDIVKFDDEGLLYIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKEDIIAHCREHLTGYKIPKLVEFRDDLPKT
NVGKILRRVLREENDAELAKRASE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggctttcacgttatccaagtgacgtaccagaaacgatcaacccagat
cagtacccatctcttgtagaaatgtttgaacagtcggtacagaagtacgcggaccaacct
gcattcgagaacatgggctcgattatgacattccgtaagcttgaagagcgcagccgtgct
tttgccgcttacttgcagaatgacttaaaactgaagaagggcgatcgcgtcgcgcttatg
atgccaaacctactgcaatacccaattgcactgtttggtgtattacgtgccggtatgatt
gcagtgaacgtcaacccactttacacacctcgtgagcttgaacatcaactgaacgattct
ggtgcaaaggcgattgttatcgtatctaactttgcaagcacgctagagaaagtagttgat
aacacaccagtgaaacacgttgttctaactagcctaggtcaaatgttacctcgtgcgaaa
ggtacaattgtcgacttcgtagtgaaatacgtaaaaggtatggtgcctaagtatgatcta
ccgggtgcgatttcattcagaaaagcgcttcataaaggtcgtcgtcttcaatacgtgaag
ccgtttatggcgggtgatgacattgcattcctgcagtatacgggcggcacaacgggtgta
gcgaaaggcgcaatcctaacgcaccgcaatatgattgcgaacgtacttcaagcgaaaggg
gcgtatggtcctgttttgcaagagggccgtgagttggttgtgacagcactgccgctttac
catgttttcgccctaacagtgaactgcttactgtttgttgagatgggtggccgtaacctt
cttattactaaccctcgtgatatccctggcttcatcaaagaactgcaaaaagttccgttt
accgcgattactggtgtaaacaccctgttcaatgcgttagtgaacaacgaagatttccac
gaattggatttcagtaacatgcgtctgtctgttggcggcggcatggcggttcaacgagct
gttgctgagcaatggaagaaagtgactggcgtccacctattggaaggttatggtttaacc
gaatgttcaccactggtaacgggtaacccatacgatctgaaagactatacaggtgcgatt
ggcctaccagtaccatcgacagaggttcgtattgttgatgatgaaggcaaagttattgct
aatgaccaagtgggtgagcttcaagttcgtggtcctcaagtgatgcaaggctactggcaa
cgtccagaagcgaccaaagaagtgatcgaccaagatggttggttatcgactggtgatatc
gttaaatttgatgacgaaggcttgttgtacatcgtagaccgtaagaaagacatgattctt
gtgtcaggctttaacgtttacccgaacgagatcgaagacgtagtggctctgcatggcaaa
gtgttagaagttgcggctattggccaacctcatgaagtgtctggtgagctagttaagatc
tacgttgttaagcgtgaccctagcttgactaaagaagacattatcgcgcactgtcgtgag
cacctaacgggttacaagatccctaaattagtcgagttcagagatgaccttccaaagact
aacgtaggtaagatcttacgccgcgtgctgcgtgaagaaaacgatgcagaattggctaaa
cgcgcgagcgaatag
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