Vibrio gigantis: MID13_11280
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Entry
MID13_11280 CDS
T08202
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00020
Citrate cycle (TCA cycle)
vgi00190
Oxidative phosphorylation
vgi00650
Butanoate metabolism
vgi00720
Other carbon fixation pathways
vgi01100
Metabolic pathways
vgi01110
Biosynthesis of secondary metabolites
vgi01120
Microbial metabolism in diverse environments
vgi01200
Carbon metabolism
Module
vgi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vgi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vgi_M00149
Succinate dehydrogenase, prokaryotes
vgi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MID13_11280 (sdhA)
00650 Butanoate metabolism
MID13_11280 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
MID13_11280 (sdhA)
00720 Other carbon fixation pathways
MID13_11280 (sdhA)
Enzymes [BR:
vgi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MID13_11280 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
BEX
FAD_oxidored
Lycopene_cycl
OPA3
Ins_P5_2-kin
Motif
Other DBs
NCBI-ProteinID:
ULN63501
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All DBs
Position
1:complement(2551388..2553154)
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AA seq
588 aa
AA seq
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MTIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDYIGDQDAIEYMCKNGPESVIELEKMGLPFSRFENGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTVFSEWYALDLVKNEDGAILGT
TALCMETGEVCYFKAKATILATGGAGRIYASTTNAHINTGDGVGMAIRAGVPMQDIEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREG
RGCDGPWGPHIKLKLDHLGKETLESRLPGVCELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQAIKQTEDGNDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLKKQDEAKPATEADIERSLERYNRWENSTDGEDPAQIRKDLQQCMQNNFSVFREGKAM
AEGLEELKAIRERLKNAHLSDKSTEFNTQRIECLELENLMETAFATAVAANFRTESRGAH
ARFDFPDRDDEQWLCHSLYNPESESMTKRGVNMEPIHREAFPPKARTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgactattcctgttcgtgagtttgatgccgtagttatcggcgctggtggtgcaggtatg
cgtgccgcactgcaaatttctgagcaaggcctatcttgtgcattgctttctaaagttttc
cctactcgttctcatacggtttcagcgcaaggcggcatcactgttgctcttggtaacgcg
catgaagaccactgggaacaacacatgtatgacacagtaaaaggttctgattacatcggt
gaccaagacgctatcgaatacatgtgtaaaaacggtcctgagtcggtaatcgaacttgaa
aaaatgggcctaccgttctctcgttttgagaacggtactatttaccagcgtcctttcggt
ggtcaatctaaaaactttggtggtgagcaagcggctcgtaccgcagctgcagccgaccgt
actggtcacgccctgcttcacacgctttaccaacaaaacattaagcacaaaacgacggtt
ttctctgagtggtatgcactggaccttgttaagaatgaagacggtgcaatcttaggtaca
accgcgctttgtatggaaacaggcgaagtttgttacttcaaagcgaaggcaacaatcctt
gctactggtggtgctggtcgtatctacgcttcgacaactaacgcacacatcaacactggt
gacggtgttggtatggcgattcgtgctggcgttccaatgcaagacatcgaaatgtggcag
ttccacccaacgggtatcgctggtgcaggtgtattggtaacggaaggttgtcgtggggaa
ggtggttaccttctcaataaagacggcgaacgcttcatggaacgttacgcaccaaacgct
aaagacttagcgggtcgtgatgttgttgctcgttcaatgatggttgaaattcgtgaaggt
cgcggttgcgatggcccttggggtccgcacatcaagctgaaacttgatcacctaggtaaa
gagacacttgaatctcgtcttcctggtgtatgtgaactgtctcgtacctttgctcacgtt
gatccagtaaaagagccaatcccagtaatcccaacgtgtcactacatgatgggtggtgtt
ccaacacaagtttctggtcaagctattaagcaaactgaagatggcaatgatgttgaaatc
caaggactatttgcttgtggtgaaatcgcatcagtatcagtacatggtgccaaccgtcta
ggtggtaactcactacttgatttggtggtatttggtcgtgcaacaggtctgcacctaggt
gagactctgaagaagcaagacgaagcgaaaccagcaactgaagcagacattgagcgttct
ctagagcgttacaaccgttgggaaaacagtactgacggcgaagaccctgctcaaatccgt
aaagatcttcaacaatgtatgcagaataacttctcagtattccgtgaaggcaaagcaatg
gctgaaggcctagaagagcttaaagcgattcgcgagcgtctgaagaatgcacacctatct
gacaagtcgacagagttcaacacgcaacgtatcgagtgtctagagcttgaaaacctgatg
gaaactgcattcgcaacagcggttgctgcaaatttccgtacagagagccgtggtgcacac
gctcgattcgatttccctgaccgtgatgatgagcaatggctatgccactctctttacaac
ccagagtcagagagcatgactaagcgtggtgtaaacatggaacctatccatcgtgaagcg
ttcccaccaaaagcacgtacgtactaa
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