Vibrio gigantis: MID13_11575
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Entry
MID13_11575 CDS
T08202
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00300
Lysine biosynthesis
vgi01100
Metabolic pathways
vgi01120
Microbial metabolism in diverse environments
vgi01230
Biosynthesis of amino acids
Module
vgi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MID13_11575 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vgi01002
]
MID13_11575 (dapE)
Enzymes [BR:
vgi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
MID13_11575 (dapE)
Peptidases and inhibitors [BR:
vgi01002
]
Metallo peptidases
Family M20
MID13_11575 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ULN63558
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All DBs
Position
1:2609500..2610636
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AA seq
378 aa
AA seq
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MTDSPTLALAKDLISRQSVTPEDAGCQDLMIERLKALGFEIEVMVFEDTTNFWARRGTEA
PLFAFAGHTDVVPAGPIEQWNTKPFEPTIIDGFLHGRGAADMKGSLASMIVAVEQFIAKH
PNHAGSIGFLITSDEEGPFINGTVRVVEALMARGENIDMCIVGEPSSTEFVGDVVKNGRR
GSITGDLTIKGTQGHVAYPHLANNPVHSSLLAINELATTEWDKGNDYFPPTSFQIPNVSA
GTGASNVIPGEFNVQFNLRFSTELSNDIIVERITTTLDKYDFEYDLKWTFNGDPFLTDAG
SLLDAIVDAVGDVNDVKPALLTTGGTSDGRFIARMGGQVVELGPVNATIHKVNECVKVAD
LEKLTDMYEKTLVNLFAK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagcccaactttggctctggcaaaagacttaatcagccgtcaatcagtaaca
ccagaagatgcaggctgccaagacctgatgattgaacgcttaaaagcactcggctttgaa
atcgaagtgatggtatttgaggatacgacgaacttctgggctcgccgtggtactgaagcg
cctctgtttgcttttgctggtcacactgatgtggtgcctgctggcccgattgagcagtgg
aacactaagccattcgagccgactatcatagacggtttcttgcatggccgtggcgcagca
gacatgaagggctctctggcttcaatgattgttgcagtagagcaattcattgccaaacac
ccaaaccacgcaggctcaatcggtttcctgatcacttcagatgaagaaggcccttttatc
aacggtaccgtacgtgttgttgaagcattaatggctcgtggtgagaacatcgacatgtgt
attgttggtgaaccatcgagcactgaattcgtaggcgatgttgtgaagaacggccgccgt
ggctctatcacaggcgatctaacgattaaaggcacacaaggtcatgttgcctaccctcac
ctagcgaacaacccagtacacagctctctgcttgctatcaatgagctggcaacgaccgag
tgggacaaaggtaatgattacttcccaccaaccagtttccaaatcccaaatgtaagtgcg
ggcactggggcttcaaatgtaattcctggtgagtttaatgttcagtttaacctccgtttt
agtactgagttaagtaacgacattatcgttgagcgaatcacaacgacgctcgataagtac
gacttcgaatacgatcttaagtggacattcaatggcgacccgttcttaacagacgctggc
tcattacttgatgcaattgttgatgctgtcggtgacgtgaatgatgttaaacctgcgctg
cttaccacaggtggtacatctgatggtcgctttattgctcgcatgggcggacaagtagtt
gaactaggccctgtgaacgcgacgattcacaaggttaacgagtgcgtaaaagtagccgat
ttagagaagctaactgacatgtacgaaaaaacattagtgaacctgttcgctaaatag
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