Vibrio gigantis: MID13_11925
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Entry
MID13_11925 CDS
T08202
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00260
Glycine, serine and threonine metabolism
vgi00460
Cyanoamino acid metabolism
vgi00630
Glyoxylate and dicarboxylate metabolism
vgi00670
One carbon pool by folate
vgi00680
Methane metabolism
vgi01100
Metabolic pathways
vgi01110
Biosynthesis of secondary metabolites
vgi01120
Microbial metabolism in diverse environments
vgi01200
Carbon metabolism
vgi01230
Biosynthesis of amino acids
vgi01240
Biosynthesis of cofactors
vgi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MID13_11925
09102 Energy metabolism
00680 Methane metabolism
MID13_11925
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MID13_11925
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MID13_11925
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MID13_11925
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MID13_11925
Enzymes [BR:
vgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MID13_11925
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ULN63627
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Position
1:complement(2678333..2679583)
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AA seq
416 aa
AA seq
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MLKRDMNIADYDADLFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKVETLAIERACELFGAQYANVQPHSGSQANNAVYMALLNAGDTVLGMS
LAHGGHLTHGSPVNFSGKLYNIIPYGIDEAGQIDYEEMEALAIEHKPKMIIGGFSAYSQV
CDWKRMREIADKVGAYFFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
SNEGEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKEYQARVVANAKAMVAE
FLARGYNIVSGSTENHLFLVDLIDKDITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRIGSPSITRRGFSEADAKELAGWICDILDNMGDESVIEATKAKVLNICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgacatgaacattgctgattacgatgcggacctattcgcagctatccaa
gaagaaactcttcgtcaggaagagcacatcgaacttatcgcttcagaaaactacacaagc
ccacgtgtaatggaagctcaaggttctcagcttacaaacaaatacgctgaaggttaccca
ggcaagcgttactacggtggttgtgagtacgtagataaagttgaaactctagcaatcgaa
cgtgcatgtgaactgtttggcgctcaatacgcaaacgtacaacctcactcaggttctcaa
gcaaacaacgctgtatacatggcgctactgaatgctggtgatacggttcttggtatgagc
ctagcgcacggtggtcacctaactcacggttctccagtgaacttctctggtaagctttac
aacatcatcccttacggtatcgatgaagcaggtcaaatcgattacgaagagatggaagcg
ctagctatcgagcacaagcctaagatgatcatcggcggtttctcagcttactctcaagtt
tgtgattggaagcgcatgcgtgaaatcgctgataaagtaggcgcttacttcttcgtagat
atggctcacgttgctggtctaatcgctgcaggcgtttacccgaacccagttccacacgct
cacgttgtaacaacgacaacacacaagacgcttgctggtcctcgtggtggtcttatcctt
tctaacgaaggcgaagatctttacaagaagctaaactcagcagtattcccaggcggccaa
ggtggtcctctaatgcacgttatcgctggtaaagcagtagcgttcaaagaagctctagag
ccagaattcaaagaataccaagctcgcgtagttgctaacgcaaaagcaatggttgctgaa
ttccttgcacgcggttacaacatcgtttcaggttctacagagaaccacctgttcctagtt
gacctaatcgacaaagacatcacaggtaaagaagcagatgcagcactaggtgcagcgaac
atcacagtgaacaagaactctgtaccaaacgatccacgtagcccgttcgttacttcaggt
atccgtatcggttctccttctatcactcgtcgcggtttctcagaagcagacgcgaaagag
ctagcaggttggatctgtgacatcctagataacatgggtgacgagtctgttatcgaagca
acaaaagcaaaagtactaaatatctgtaagcgtctacctgtttacgcttaa
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