Vibrio gigantis: MID13_12385
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Entry
MID13_12385 CDS
T08202
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_12385 (radA)
DNA repair and recombination proteins [BR:
vgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MID13_12385 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
SLFN-g3_helicase
GvpD_P-loop
AAA
AAA_22
Rad51
RecA
AAA_14
ABC_tran
AAA_16
NTPase_1
nSTAND3
Viral_helicase1
Zeta_toxin
AAA_24
Zn_ribbon_Thio2
AAA_29
AAA_5
DUF7125
Zn_ribbon_8
cobW
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ULN63717
LinkDB
All DBs
Position
1:complement(2781934..2783313)
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRLAASPQVARNERLSGYAGGATES
SVQTLSEIDLQEVPRFSSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCQLSS
QLPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQVAEKEQPKIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFLVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRALPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAINAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcaaaacgagcttatgtgtgtaatgactgtggtgctgactttccacgttgg
caggggcagtgcaacgcgtgtggtgcttggaacacgattacagaagttaggttagccgct
tcacctcaggtagcgcgcaatgaacgattgagtggttatgctggtggtgcaaccgagtct
tcagttcaaacgctgtcggaaatcgacttgcaagaagtgccacgctttagcagtggcttt
aaagaactcgaccgcgtactcggtggtggtgtggtaccgggtgctgcgattctgattggt
ggtaaccctggtgcgggtaaatcaacgctgttattgcagactatgtgtcagttatcttca
caattaccgactctttatgtcacaggggaagaatccctacagcaggttgcgatgcgagcc
tctcgacttggattaccgaaagagcacctaaagatgctctctgaaaccaacgttgataag
atctgtcaggttgctgaaaaagagcagccaaagatcatggttatcgactcaatccaagtt
atgcatgttgctgatgttcaatcttcaccgggcagtgtcgctcaggttcgtgaatcagca
accgcgttaacgcgctacgcaaaacaaaataatgttgctgtgttcttagtgggacacgta
actaaagacggcaccttagccgggccaaaagtgcttgagcacataattgactgttccgtt
ctattggatggcggaaccgatagtcgctttagaacattgcgcagtcacaaaaaccgtttt
ggtgcggtcaatgaactcggtgtgtttgctatgactggtcaaggactaaaagaagtcagc
aacccatcggcgattttcttgtctcgtggtgaagaagaaacctcgggcagttcggttatg
gttgtatgggaaggcactcgtccactgcttgtcgaaatccaagcgctggtggactattcc
cagctggctaatccgcgtcgtgtcgctgtcggtctagaacaaaaccggctttcgttgtta
ttagcggtgctgcataaacacggcggtttacaaatggctgatcaagatgtgtttgtgaat
gtcgtcggtggtgttaaagtaaccgaaaccagtgctgatcttgcgttggtgatggcttta
ctttcaagtttcagagaccgtgcattgccaaaagatgtggtggtatttggagaagtgggc
ctagcgggtgagattagaccggtaccgagtgggcaagagcgtcttaatgaggcatttaaa
catggctttaagaaagcgatcgtaccggcagcaaacatgcctaaaggtggcattcctgga
atgcagatccacggcgtaaaaaaattatcggaagcaattaatgcttttgatgagttgtaa
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